Výsledky vyhledávání - "Jasmin Schwarz"

Akademický článek

An Economical and Flexible Dual Barcoding, Two-Step PCR Approach for Highly Multiplexed Amplicon Sequencing

Autor: Petra Pjevac, Bela Hausmann, Jasmin Schwarz, Gudrun Kohl, Craig W. Herbold, Alexander Loy, David Berry

Publikováno v: Frontiers in Microbiology, Vol 12 (2021)

In microbiome research, phylogenetic and functional marker gene amplicon sequencing is the most commonly-used community profiling approach. Consequently, a plethora of protocols for the preparation and multiplexing of samples for amplicon sequencing

Externí odkaz: https://doaj.org/article/a85765d7d4624e3aa8777be19b66b139

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Akademický článek

Characterization of the First 'Candidatus Nitrotoga' Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria

Autor: Katharina Kitzinger, Hanna Koch, Sebastian Lücker, Christopher J. Sedlacek, Craig Herbold, Jasmin Schwarz, Anne Daebeler, Anna J. Mueller, Michael Lukumbuzya, Stefano Romano, Nikolaus Leisch, Søren Michael Karst, Rasmus Kirkegaard, Mads Albertsen, Per Halkjær Nielsen, Michael Wagner, Holger Daims

Publikováno v: mBio, Vol 9, Iss 4 (2018)

ABSTRACT Nitrification is a key process of the biogeochemical nitrogen cycle and of biological wastewater treatment. The second step, nitrite oxidation to nitrate, is catalyzed by phylogenetically diverse, chemolithoautotrophic nitrite-oxidizing bact

Externí odkaz: https://doaj.org/article/f32eb15baa5843dcbb335637f3419283

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Impaired Mucosal Homeostasis in Short-Term Fiber Deprivation Is Due to Reduced Mucus Production Rather Than Overgrowth of Mucus-Degrading Bacteria

Autor: Annelieke Overbeeke, Michaela Lang, Bela Hausmann, Margarete Watzka, Georgi Nikolov, Jasmin Schwarz, Gudrun Kohl, Kim De Paepe, Kevin Eislmayr, Thomas Decker, Andreas Richter, David Berry

Publikováno v: Nutrients
Nutrients; Volume 14; Issue 18; Pages: 3802
NUTRIENTS

The gut mucosal environment is key in host health; protecting against pathogens and providing a niche for beneficial bacteria, thereby facilitating a mutualistic balance between host and microbiome. Lack of dietary fiber results in erosion of the muc

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8aa8fdcc3731c339ae3bce2cd98d799d
https://phaidra.univie.ac.at/o:1632218

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Correction:Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system

Autor: Laura A. Sauder, Mads Albertsen, Katja Engel, Jasmin Schwarz, Per H. Nielsen, Michael Wagner, Josh D. Neufeld

Publikováno v: Sauder, L A, Albertsen, M, Engel, K, Schwarz, J, Nielsen, P H, Wagner, M & Neufeld, J D 2020, ' Correction : Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system ', ISME Journal, vol. 14, no. 9, pp. 2366 . https://doi.org/10.1038/s41396-020-0714-3
The ISME Journal

Thaumarchaeota have been detected in several industrial and municipal wastewater treatment plants (WWTPs), despite the fact that ammonia-oxidizing archaea (AOA) are thought to be adapted to low ammonia environments. However, the activity, physiology

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::46188673916c2850e229b70efd34dfce
https://vbn.aau.dk/da/publications/fcfc6215-2e87-4832-a5bb-1dfa0ad298fd

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Molecular causes of an evolutionary shift along the parasitism-mutualism continuum in a bacterial symbiont

Autor: Lena König, Matthias Horn, Thomas Kempinger, Thomas Rattei, Paul Herrera, Cecilia Wentrup, Hyunsoo Na, Stephan Köstlbacher, Markus Zojer, Lisa N. Schuster, Florian Wascher, Jasmin Schwarz

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America
Proceedings of the National Academy of Sciences of the United States of America, vol 117, iss 35

Significance Symbiotic relationships with microbes are ubiquitous among living beings and can be parasitic, such as in bacterial pathogens, or mutualistic, as in beneficial microbiomes. Among other factors, the outcome of microbe–host relationships

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5fc430326772ccd911cb3ab692c58bb0
https://pubmed.ncbi.nlm.nih.gov/32817434

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Exploring the upper pH limits of nitrite oxidation: diversity, ecophysiology, and adaptive traits of haloalkalitolerant Nitrospira

Autor: Jasmin Schwarz, Michaela Steinfeder, Michael Wagner, Thomas Zechmeister, Katharina Kitzinger, Anne Daebeler, Per Halkjær Nielsen, Craig W. Herbold, Holger Daims, Hanna Koch, Mads Albertsen, Søren Michael Karst

Publikováno v: The Isme Journal, 14, 2967-2979
The ISME Journal
Daebeler, A, Kitzinger, K, Koch, H, Herbold, C W, Steinfeder, M, Schwarz, J, Zechmeister, T, Karst, S M, Albertsen, M, Nielsen, P H, Wagner, M & Daims, H 2020, ' Exploring the upper pH limits of nitrite oxidation : diversity, ecophysiology, and adaptive traits of haloalkalitolerant Nitrospira ', ISME Journal, vol. 14, no. 12, pp. 2967-2979 . https://doi.org/10.1038/s41396-020-0724-1
The Isme Journal, 14, 12, pp. 2967-2979

Nitrite-oxidizing bacteria of the genus Nitrospira are key players of the biogeochemical nitrogen cycle. However, little is known about their occurrence and survival strategies in extreme pH environments. Here, we report on the discovery of physiolog

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5d3d068607a01a5ee58fe4aba226f683
http://hdl.handle.net/2066/225858

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Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system

Autor: Michael Wagner, Jasmin Schwarz, Per Halkjær Nielsen, Mads Albertsen, Katja Engel, Laura A. Sauder, Josh D. Neufeld

Publikováno v: The ISME Journal
Sauder, L A, Albertsen, M, Engel, K, Schwarz, J, Nielsen, P H, Wagner, M & Neufeld, J D 2017, ' Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system ', ISME Journal, vol. 11, no. 5, pp. 1142-1157 . https://doi.org/10.1038/ismej.2016.192

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a4334e6985b7777a17d9134dbd96536f
http://europepmc.org/articles/PMC5398378

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Characterization of the First ' Candidatus Nitrotoga' Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria

Autor: Stefano Romano, Holger Daims, Craig W. Herbold, Rasmus Hansen Kirkegaard, Anna J. Mueller, Søren Michael Karst, Michael Wagner, Christopher J. Sedlacek, Katharina Kitzinger, Nikolaus Leisch, Anne Daebeler, Per Halkjær Nielsen, Jasmin Schwarz, Michael Lukumbuzya, Hanna Koch, Sebastian Lücker, Mads Albertsen

Publikováno v: Kitzinger, K, Koch, H, Lücker, S, Sedlacek, C J, Herbold, C, Schwarz, J, Daebeler, A, Mueller, A J, Lukumbuzya, M, Romano, S, Leisch, N, Karst, S M, Kirkegaard, R, Albertsen, M, Nielsen, P H, Wagner, M & Daims, H 2018, ' Characterization of the first “Candidatus nitrotoga” isolate reveals metabolic versatility and separate evolution of widespread nitrite-oxidizing bacteria ', mBio, vol. 9, no. 4, e01186-18 . https://doi.org/10.1128/mBio.01186-18
Mbio, 9, 4, pp. 1-16
mBio
Mbio, 9, 1-16
mBio, Vol 9, Iss 4 (2018)
mBio, Vol 9, Iss 4, p e01186-18 (2018)

Nitrification is a key process of the biogeochemical nitrogen cycle and of biological wastewater treatment. The second step, nitrite oxidation to nitrate, is catalyzed by phylogenetically diverse, chemolithoautotrophic nitrite-oxidizing bacteria (NOB

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f1d96537b4364509b3444b33edb9f013
https://doi.org/10.1128/mbio.01186-18

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