Zobrazeno 1 - 10
of 22
pro vyhledávání: '"Jase, Gehring"'
Publikováno v:
Scientific Reports, Vol 13, Iss 1, Pp 1-2 (2023)
Externí odkaz:
https://doaj.org/article/cf1fadd14ba642a49863433088ecba8e
Autor:
A. Sina Booeshaghi, Nathan B. Lubock, Aaron R. Cooper, Scott W. Simpkins, Joshua S. Bloom, Jase Gehring, Laura Luebbert, Sri Kosuri, Lior Pachter
Publikováno v:
Scientific Reports, Vol 10, Iss 1, Pp 1-7 (2020)
Abstract Scalable, inexpensive, and secure testing for SARS-CoV-2 infection is crucial for control of the novel coronavirus pandemic. Recently developed highly multiplexed sequencing assays (HMSAs) that rely on high-throughput sequencing can, in prin
Externí odkaz:
https://doaj.org/article/fd9d2f00173b429397dc016800968d3a
Publikováno v:
HardwareX, Vol 10, Iss , Pp e00201- (2021)
We present colosseum, a low-cost, modular, and automated fluid sampling device for scalable fluidic applications. The colosseum fraction collector uses a single motor, can be built for less than $100 using off-the-shelf and 3D-printed components, and
Externí odkaz:
https://doaj.org/article/b4a41bfe82df4d4c835911d27a41e337
Autor:
Kaitlyn A Barrow, Sarah Heidl, Elisabeth Brandstetter, Deborah A. Nickerson, Rachel E. Geyer, Sanjay Srivatsan, Eric Q. Konnick, Nahum Smith, Mark J. Rieder, Sriram Kosuri, Helen Y. Chu, Lea M. Starita, Misja Ilcisin, Shari Cho, L.M. Rich, Luis Gamboa, Denise J. McCulloch, Jay Shendure, Jeremy Stone, Jordan Opsahl, Ashley E. Kim, Caitlin R Wolf, Christina M. Lockwood, Peter D Han, Melissa Truong, Trevor Bedford, Wei Chen, Evan McDermot, Beth Martin, Sarah L Sohlberg, Brian Pfau, Jase Gehring, Katrina van Raay, Jason S Debley, Weizhi Zhong
Publikováno v:
Clinical Chemistry
Background The urgent need for massively scaled clinical testing for SARS-CoV-2, along with global shortages of critical reagents and supplies, has necessitated development of streamlined laboratory testing protocols. Conventional nucleic acid testin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::55355157bb2aff841a5849a64f40fe95
https://doi.org/10.1093/clinchem/hvab132
https://doi.org/10.1093/clinchem/hvab132
Barcode-based sequence census assays utilize custom or random oligonucloetide sequences to label various biological features, such as cell-surface proteins or CRISPR perturbations. These assays all rely on barcode quantification, a task that is compl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::15b02e9696350daa80852528c0b396a7
https://doi.org/10.1101/2022.10.09.511501
https://doi.org/10.1101/2022.10.09.511501
Publikováno v:
Nature Biotechnology. 38:35-38
We describe a universal sample multiplexing method for single-cell RNA sequencing in which fixed cells are chemically labeled by attaching identifying DNA oligonucleotides to cellular proteins. Analysis of a 96-plex perturbation experiment revealed c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::419a2535cc0ae16be62e1813cd5ade9e
https://doi.org/10.1038/s41587-019-0372-z
https://doi.org/10.1038/s41587-019-0372-z
We present colosseum, a low-cost, modular, and automated fluid sampling device for scalable fluidic applications. The colosseum fraction collector uses a single motor, can be built for less than $100 using off-the-shelf and 3D-printed components, and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8dd5c0c1709d2ca198fe936d445dd146
https://doi.org/10.17504/protocols.io.btz3np8n
https://doi.org/10.17504/protocols.io.btz3np8n
Autor:
Makenna Herl, Fan Gao, Tara Chari, David J. Anderson, Lior Pachter, Sandra Chevalier, Lucas Leclère, Jase Gehring, Evelyn Houliston, Richard R. Copley, Brandon Weissbourd, Anna Ferraioli
We present an organism-wide, transcriptomic cell atlas of the hydrozoan medusaClytia hemisphaerica, and determine how its component cell types respond to starvation. Utilizing multiplexed scRNA-seq, in which individual animals were indexed and pooled
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a4d3f3bc192516513fb91268cee93a66
https://doi.org/10.1101/2021.01.22.427844
https://doi.org/10.1101/2021.01.22.427844
Autor:
Scott W. Simpkins, Nathan B. Lubock, A. Sina Booeshaghi, Laura Luebbert, Jase Gehring, Aaron R. Cooper, Lior Pachter, Sriram Kosuri, Joshua S. Bloom
Scalable, inexpensive, accurate, and secure testing for SARS-CoV-2 infection is crucial for control of the novel coronavirus pandemic. Recently developed highly multiplexed sequencing assays that rely on high-throughput sequencing (HMSAs) can, in pri
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2c5902b2039923360d202996ef65de6d
Autor:
Rachel E. Geyer, Sanjay Srivatsan, Sarah L Sohlberg, Kaitlyn A Barrow, Luis Gamboa, Elisabeth Brandstetter, Jordan Opsahl, Deborah A. Nickerson, Brian Pfau, Seattle Flu Study Investigators, Nahum Smith, Sarah Heidl, Helen Y. Chu, Mark J. Rieder, L.M. Rich, Jason S Debley, Peter D Han, Eric Q. Konnick, Weizhi Zhong, Beth Martin, Sriram Kosuri, Wei Chen, Lea M. Starita, Misja Ilcisin, Shari Cho, Christina M. Lockwood, Jay Shendure, Melissa Truong, Ashley E. Kim, Trevor Bedford, Caitlin R Wolf, Evan McDermot, Denise J. McCulloch, Jeremy Stone, Jase Gehring, Katrina van Raay
Structured AbstractBackgroundThe urgent need for massively scaled clinical testing for SARS-CoV-2, along with global shortages of critical reagents and supplies, has necessitated development of streamlined laboratory testing protocols. Conventional n
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2dfb95e5ad7b58e0818055e9f224638a
https://doi.org/10.1101/2020.04.22.056283
https://doi.org/10.1101/2020.04.22.056283