Zobrazeno 1 - 10
of 69
pro vyhledávání: '"Jaroslav ŠPonar"'
Publikováno v:
Journal of Molecular Structure. :585-589
A leucine zipper (bZIP) binding peptide BP1 was constructed based on the DNA binding sequence of the GCN4 protein, slightly modified to make it more similar to the sequence of other bZIP proteins (Jun) with related DNA binding specificity. Selfcomple
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::37464a415e43ad160ffb40559b31a22d
https://doi.org/10.1016/s0022-2860(98)00826-6
https://doi.org/10.1016/s0022-2860(98)00826-6
Publikováno v:
ResearcherID
A leucine zipper (bZip) binding peptide BP1 was constructed based on the DNA binding sequence of the GCN4 protein, slightly modified to make it more similar to the sequence of other bZip proteins (Jun) with related DNA binding specificity. Self-compl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0494f1e1a67946fc42d8433c08c290e4
https://doi.org/10.1080/07391102.1997.10508968
https://doi.org/10.1080/07391102.1997.10508968
Publikováno v:
Gene. 156:277-281
The 5′-end of the duck βA-globin promoter contains a protein binding site BS-3/Spl, the A + T-rich part of which could be involved in DNA bending. Plasmids were constructed using the pBend2 plasmid containing BS-3/Spl. Circular permutation analysi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fddf68022ebfabb5c26f9705786a61b8
https://doi.org/10.1016/0378-1119(95)00057-d
https://doi.org/10.1016/0378-1119(95)00057-d
Publikováno v:
Journal of Biomolecular Structure and Dynamics. 11:869-880
The empirical potential including the intra- and intermolecular energy terms was used to study the interaction of L-Lysine-L-Alanine-L-Alanine Tripeptide with four models of B-DNA with different compositions. On the basis of a detailed search of the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cd0c2e3fa750ce169dc213089a4c9ad6
https://doi.org/10.1080/07391102.1994.10508038
https://doi.org/10.1080/07391102.1994.10508038
Autor:
Jaroslav Šponar, Hana Votavová
Publikováno v:
International Journal of Biological Macromolecules. 15:139-144
The effect of basic oligopeptides (Lys-Ala-Ala)n and (Lys-Leu-Ala)n (n = 1-4) on the B-Z transition of poly(dG-m5dC).poly(dG-m5dC) in aqueous solution and in methanol-water mixtures was investigated by c.d. spectroscopy. In aqueous solution dimers an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::18b0e513d246cc33a973a049f9be84d0
https://doi.org/10.1016/0141-8130(93)90016-f
https://doi.org/10.1016/0141-8130(93)90016-f
Publikováno v:
Biopolymers. 31:275-283
The effect of basic oligopeptides (Lys-Ala-Ala)n (n = 1-5, 10) and (Lys-Leu-Ala)n (n = 1-4) on the B-Z transition of poly(dG-dC).poly(dG-dC) in water-methanol solutions was investigated using CD and uv spectroscopy. In the absence of peptides, the co
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5ff390058c0e40361b385985a3cfde77
https://doi.org/10.1002/bip.360310303
https://doi.org/10.1002/bip.360310303
Publikováno v:
Journal of Computational Chemistry. 12:9-16
Interaction of a rigid fragment of B-DNA (polyanionic as well as screened by Na+ cations) with the flexible tripeptide Lys-Ala-Ala (in both L and D configurations) were investigated with the aid of an empirical potential. The potential consists of in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a9d18e9a0b7af9d627df6b3f1ba368f7
https://doi.org/10.1002/jcc.540120103
https://doi.org/10.1002/jcc.540120103
Autor:
Jaroslav Šponar, Jaromir Vlach
Publikováno v:
Journal of Biomolecular Structure and Dynamics. 7:1083-1093
We have analysed by various approaches the structure of cloned synthetic sequences in supercoiled plasmids. Individual inserts were formed by d(C-G)n blocks interrupted by the presence of A.T pairs positioned either in phase or out of phase of pur-py
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::50fff91a4af304317f480e2874211e7b
https://doi.org/10.1080/07391102.1990.10508548
https://doi.org/10.1080/07391102.1990.10508548
Autor:
Hana Votavová, Jaroslav Šponar
Publikováno v:
Journal of biomolecular structuredynamics. 13(6)
Repetitive basic polypeptides containing lysine or arginine as every third amino acid were shown to cause DNA condensation at physiological salt concentration connected with selective DNA binding with respect to DNA composition and sequence. This sel
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0ba0faa7a8c4d99f21052bc131a29a94
https://pubmed.ncbi.nlm.nih.gov/8832380
https://pubmed.ncbi.nlm.nih.gov/8832380
Publikováno v:
Journal of biomolecular structuredynamics. 12(1)
Ten oligonucleotides of the length 8-12 base pairs have been synthesized, which contain, in addition to the obligatory sequences CG/CG, sequences not favorable for the transition to the Z conformation (A.T pairs, GG/CC or AA/TT sequences). Conformati
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2326567dcf789d1bf38946de1fe64668
https://pubmed.ncbi.nlm.nih.gov/7848565
https://pubmed.ncbi.nlm.nih.gov/7848565