Zobrazeno 1 - 10
of 69
pro vyhledávání: '"Jarmusch AK"'
Autor:
Kelly C. Weldon, Alison Vrbanac, Elijah Eo, Pieter C. Dorrestein, Robert A. Quinn, Daniel Petras, Fernando Vargas, Madeleine Ernst, Nothias-Esposito M, Sikora N, Amina Bouslimani, Julia M. Gauglitz, Advani Rs, Nhu H. Nguyen, Riya Christina Menezes, Mingxun Wang, Rob Knight, Aguire S, Laura-Isobel McCall, Giraldo Yam, Rodriguez Amc, Zdeněk Kameník, Alexander A. Aksenov, Jones Kl, Nuno Bandeira, Bolleddu S, Gajender Aleti, Roxana Coras, Gentry Ec, Michael J. Meehan, Nothias Lf, van der Hooft Jj, Husband M, Aceves Cm, Allegra T. Aron, Le Gouellec A, Anelize Bauermeister, Scott A. Jarmusch, Chaar R, Panitchpakdi M, Lu A, Jarmusch Ak, Alexey V. Melnik, Kerry L. McPhail
Metabolomics data are difficult to find and reuse, even in public repositories. We, therefore, developed the Reanalysis of Data User (ReDU) interface (https://redu.ucsd.edu/), a community- and data-driven approach that solves this problem at the repo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f458d78513df08a302211fbf75410b9c
https://doi.org/10.1101/750471
https://doi.org/10.1101/750471
Autor:
Zhao HN, Kvitne KE, Brungs C, Mohan S, Charron-Lamoureux V, Bittremieux W, Tang R, Schmid R, Lamichhane S, El Abiead Y, Andalibi MS, Mannochio-Russo H, Ambre M, Avalon NE, Bryant M, Caraballo-Rodríguez AM, Maya MC, Chin L, Ellis RJ, Franklin D, Girod S, Gomes PWP, Hansen L, Heaton R, Iudicello JE, Jarmusch AK, Khatib L, Letendre S, Magyari S, McDonald D, Mohanty I, Cumsille A, Moore DJ, Rajkumar P, Ross DH, Sapre H, Shahneh MRZ, Thomas SP, Tribelhorn C, Tubb HM, Walker C, Wang CX, Xing S, Zemlin J, Zuffa S, Wishart DS, Kaddurah-Daouk R, Wang M, Raffatellu M, Zengler K, Pluskal T, Xu L, Knight R, Tsunoda SM, Dorrestein PC
Publikováno v:
BioRxiv : the preprint server for biology [bioRxiv] 2024 Oct 10. Date of Electronic Publication: 2024 Oct 10.
Autor:
Haque E; Human Toxicology Program, Graduate College, University of Iowa, Iowa City, Iowa, USA; Department of Occupational and Environmental Health, College of Public Health, University of Iowa, Iowa City, Iowa, USA; Immunity, Inflammation, and Disease Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina, USA., Adamcakova-Dodd A; Department of Occupational and Environmental Health, College of Public Health, University of Iowa, Iowa City, Iowa, USA., Jing X; Department of Occupational and Environmental Health, College of Public Health, University of Iowa, Iowa City, Iowa, USA., Wang H; Department of Occupational and Environmental Health, College of Public Health, University of Iowa, Iowa City, Iowa, USA., Jarmusch AK; Immunity, Inflammation, and Disease Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina, USA., Thorne PS; Human Toxicology Program, Graduate College, University of Iowa, Iowa City, Iowa, USA; Department of Occupational and Environmental Health, College of Public Health, University of Iowa, Iowa City, Iowa, USA. Electronic address: peter-thorne@uiowa.edu.
Publikováno v:
Journal of hazardous materials [J Hazard Mater] 2024 Oct 09; Vol. 480, pp. 136120. Date of Electronic Publication: 2024 Oct 09.
Autor:
Jones SM; Neurobiology Laboratory, National Institute of Environmental Health Sciences, Division of Intramural Research, National Institute of Health, Research Triangle Park, NC, 27709, USA., Sleiman SJ; Neurobiology Laboratory, National Institute of Environmental Health Sciences, Division of Intramural Research, National Institute of Health, Research Triangle Park, NC, 27709, USA.; Neuroscience Curriculum, University of North Carolina, Chapel Hill, NC, 27599, USA., McCann KE; Neurobiology Laboratory, National Institute of Environmental Health Sciences, Division of Intramural Research, National Institute of Health, Research Triangle Park, NC, 27709, USA.; School of Psychology, Georgia Institute of Technology, Atlanta, GA, 30332, USA., Jarmusch AK; Immunity, Inflammation, and Disease Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, 27709, USA., Alexander GM; Neurobiology Laboratory, National Institute of Environmental Health Sciences, Division of Intramural Research, National Institute of Health, Research Triangle Park, NC, 27709, USA., Dudek SM; Neurobiology Laboratory, National Institute of Environmental Health Sciences, Division of Intramural Research, National Institute of Health, Research Triangle Park, NC, 27709, USA. dudek@niehs.nih.gov.
Publikováno v:
Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology [Neuropsychopharmacology] 2024 Sep 05. Date of Electronic Publication: 2024 Sep 05.
Autor:
Jones SM; Neurobiology Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina, USA., Kirkwood-Donelson KI; Immunity, Inflammation, and Disease Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina, USA., Alexander GM; Neurobiology Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina, USA., Perera L; Genome Integrity and Structural Biology Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina, USA., Dudek SM; Neurobiology Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina, USA., Jarmusch AK; Immunity, Inflammation, and Disease Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina, USA.
Publikováno v:
Rapid communications in mass spectrometry : RCM [Rapid Commun Mass Spectrom] 2024 Aug 15; Vol. 38 (15), pp. e9775.
Autor:
Calvert ME; Pediatric Neuroendocrinology Group, Clinical Research Branch, National Institute of Environmental Health Sciences (NIEHS), Durham, NC 27709, USA., Molsberry SA; Social & Scientific Systems, a DLH Holdings company, Durham, NC 27703, USA., Overdahl KE; Metabolomics Core Facility, NIEHS, Durham, NC 27709, USA., Jarmusch AK; Metabolomics Core Facility, NIEHS, Durham, NC 27709, USA., Shaw ND; Pediatric Neuroendocrinology Group, Clinical Research Branch, National Institute of Environmental Health Sciences (NIEHS), Durham, NC 27709, USA.
Publikováno v:
The Journal of clinical endocrinology and metabolism [J Clin Endocrinol Metab] 2024 Apr 19; Vol. 109 (5), pp. 1328-1333.
Autor:
Gentry EC; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.; Department of Chemistry, Virginia Tech, Blacksburg, VA, USA., Collins SL; Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA., Panitchpakdi M; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA., Belda-Ferre P; Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA.; Department of Computer Science and Engineering, Jacobs School of Engineering, University of California, San Diego, San Diego, CA, USA., Stewart AK; Department of Chemistry, North Carolina State University, Raleigh, NC, USA., Carrillo Terrazas M; Department of Pathology, University of California, San Diego, La Jolla, CA, USA., Lu HH; Department of Pathology, University of California, San Diego, La Jolla, CA, USA., Zuffa S; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA., Yan T; Laboratory of Metabolism, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA., Avila-Pacheco J; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Plichta DR; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Aron AT; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA., Wang M; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA., Jarmusch AK; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.; Immunity, Inflammation, and Disease Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA., Hao F; Center for Molecular Toxicology and Carcinogenesis, Department of Veterinary and Biomedical Sciences, The Pennsylvania State University, University Park, PA, USA., Syrkin-Nikolau M; Division of Gastroenterology, Department of Pediatrics, Rady Children's Hospital University of California San Diego, La Jolla, CA, USA., Vlamakis H; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Center for Microbiome Informatics and Therapeutics, Massachusetts Institute of Technology, Cambridge, MA, USA., Ananthakrishnan AN; Division of Gastroenterology, Massachusetts General Hospital, Boston, MA, USA., Boland BS; Division of Gastroenterology, University of California, San Diego, La Jolla, CA, USA., Hemperly A; Division of Gastroenterology, Department of Pediatrics, Rady Children's Hospital University of California San Diego, La Jolla, CA, USA., Vande Casteele N; Division of Gastroenterology, University of California, San Diego, La Jolla, CA, USA., Gonzalez FJ; Laboratory of Metabolism, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA., Clish CB; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Xavier RJ; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Center for Microbiome Informatics and Therapeutics, Massachusetts Institute of Technology, Cambridge, MA, USA.; Center for Computational and Integrative Biology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA.; Department of Molecular Biology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA., Chu H; Department of Pathology, University of California, San Diego, La Jolla, CA, USA.; CU-UCSD, Center for Mucosal Immunology, Allergy and Vaccine Development, University of California, San Diego, La Jolla, California, USA., Baker ES; Department of Chemistry, North Carolina State University, Raleigh, NC, USA.; Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA., Patterson AD; Center for Molecular Toxicology and Carcinogenesis, Department of Veterinary and Biomedical Sciences, The Pennsylvania State University, University Park, PA, USA., Knight R; Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA.; Department of Computer Science and Engineering, Jacobs School of Engineering, University of California, San Diego, San Diego, CA, USA.; Center for Microbiome Innovation, Jacobs School of Engineering, University of California, San Diego, San Diego, CA, USA.; Department of Bioengineering, University of California, San Diego, San Diego, California, USA., Siegel D; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA., Dorrestein PC; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA. pdorrestein@health.ucsd.edu.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA. pdorrestein@health.ucsd.edu.
Publikováno v:
Nature [Nature] 2024 Feb; Vol. 626 (7998), pp. 419-426. Date of Electronic Publication: 2023 Dec 05.
Autor:
Quiroz-Delfi GO; Genome Integrity and Structural Biology, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Durham, NC, 27709, USA.; Immunity, Inflammation, and Disease Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Durham, NC, 27709, USA.; Division of Translational Toxicology, National Institute of Environmental Health Sciences, National Institutes of Health, Durham, NC, 27709, USA., Rider CV; Division of Translational Toxicology, National Institute of Environmental Health Sciences, National Institutes of Health, Durham, NC, 27709, USA., Ferguson SS; Division of Translational Toxicology, National Institute of Environmental Health Sciences, National Institutes of Health, Durham, NC, 27709, USA., Jarmusch AK; Immunity, Inflammation, and Disease Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Durham, NC, 27709, USA., Mueller GA; Genome Integrity and Structural Biology, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Durham, NC, 27709, USA. Geoffrey.Mueller@nih.gov.
Publikováno v:
Analytical and bioanalytical chemistry [Anal Bioanal Chem] 2024 Jan; Vol. 416 (1), pp. 175-189. Date of Electronic Publication: 2023 Nov 01.
Autor:
Pei L; Laboratory of Clinical Immunology and Microbiology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, USA., Overdahl KE; Metabolomics Core Facility, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina, USA., Shannon JP; Laboratory of Clinical Immunology and Microbiology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, USA., Hornick KM; Collaborative Bioinformatics Resource, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, USA., Jarmusch AK; Metabolomics Core Facility, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina, USA., Hickman HD; Laboratory of Clinical Immunology and Microbiology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, USA.
Publikováno v:
Journal of virology [J Virol] 2023 Dec 21; Vol. 97 (12), pp. e0127223. Date of Electronic Publication: 2023 Nov 27.
Autor:
Bittremieux W; Department of Computer Science, University of Antwerp, 2020, Antwerpen, Belgium. wout.bittremieux@uantwerpen.be., Avalon NE; Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, 92093, USA., Thomas SP; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA., Kakhkhorov SA; Laboratory of Physical and Chemical Methods of Research, Center for Advanced Technologies, Tashkent, 100174, Uzbekistan.; Department of Food Science, Faculty of Science, University of Copenhagen, Rolighedsvej 26, 1958, Frederiksberg C, Denmark., Aksenov AA; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA.; Department of Chemistry, University of Connecticut, Storrs, CT, 06269, USA.; Arome Science inc., Farmington, CT, 06032, USA., Gomes PWP; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA., Aceves CM; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, 92037, USA., Caraballo-Rodríguez AM; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA., Gauglitz JM; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA., Gerwick WH; Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, 92093, USA.; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA., Huan T; Department of Chemistry, University of British Columbia, Vancouver, BC, V6T 1Z1, Canada., Jarmusch AK; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA.; Immunity, Inflammation, and Disease Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, Durham, NC, 27709, USA., Kaddurah-Daouk RF; Department of Psychiatry and Behavioral Sciences, Duke University School of Medicine, Durham, NC, 27701, USA.; Department of Medicine, Duke University, Durham, NC, 27710, USA.; Duke Institute of Brain Sciences, Duke University, Durham, NC, 27710, USA., Kang KB; College of Pharmacy and Research Institute of Pharmaceutical Sciences, Sookmyung Women's University, Seoul, 04310, Korea., Kim HW; College of Pharmacy and Integrated Research Institute for Drug Development, Dongguk University, Goyang, 10326, Korea., Kondić T; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, L-4367, Belvaux, Luxembourg., Mannochio-Russo H; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA.; Department of Biochemistry and Organic Chemistry, Institute of Chemistry, São Paulo State University, Araraquara, 14800-901, Brazil., Meehan MJ; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA., Melnik AV; Department of Chemistry, University of Connecticut, Storrs, CT, 06269, USA.; Arome Science inc., Farmington, CT, 06032, USA., Nothias LF; Université Côte d'Azur, CNRS, ICN, Nice, France.; Interdisciplinary Institute for Artificial Intelligence (3iA) Côte d'Azur, Nice, France., O'Donovan C; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK., Panitchpakdi M; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA., Petras D; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA.; Interfaculty Institute of Microbiology and Infection Medicine, University of Tuebingen, 72076, Tuebingen, Germany.; Department of Biochemistry, University of California Riverside, Riverside, CA, 92507, USA., Schmid R; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA., Schymanski EL; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, L-4367, Belvaux, Luxembourg., van der Hooft JJJ; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA.; Bioinformatics Group, Wageningen University & Research, 6708 PB, Wageningen, The Netherlands., Weldon KC; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA., Yang H; Laboratory of Natural Products Chemistry, College of Pharmacy, Kangwon National University, Chuncheon, 24341, Korea., Xing S; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA.; Department of Chemistry, University of British Columbia, Vancouver, BC, V6T 1Z1, Canada., Zemlin J; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA., Wang M; Department of Computer Science and Engineering, University of California Riverside, Riverside, CA, 92507, USA., Dorrestein PC; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, 92093, USA. pdorrestein@health.ucsd.edu.; Collaborative Mass Spectrometry Innovation Center, University of California San Diego, La Jolla, CA, 92093, USA. pdorrestein@health.ucsd.edu.
Publikováno v:
Nature communications [Nat Commun] 2023 Dec 20; Vol. 14 (1), pp. 8488. Date of Electronic Publication: 2023 Dec 20.