Exploring the potential of structure-based deep learning approaches for T cell receptor design.

Autor: Ribeiro-Filho, Helder V.¹ (AUTHOR) helder.ribeiro@lnbio.cnpem.br, Jara, Gabriel E.¹ (AUTHOR), Guerra, João V. S.^1,2 (AUTHOR), Cheung, Melyssa^3,4 (AUTHOR), Felbinger, Nathaniel R.^3,5 (AUTHOR), Pereira, José G. C.¹ (AUTHOR), Pierce, Brian G.^3,5 (AUTHOR) pierce@umd.edu, Lopes-de-Oliveira, Paulo S.^1,2 (AUTHOR) paulo.oliveira@lnbio.cnpem.br

Publikováno v: PLoS Computational Biology. 9/30/2024, Vol. 20 Issue 9, p1-39. 39p.

Structural dynamics of SARS-CoV-2 nucleocapsid protein induced by RNA binding.

Autor: Ribeiro-Filho, Helder Veras¹ (AUTHOR), Jara, Gabriel Ernesto¹ (AUTHOR), Batista, Fernanda Aparecida Heleno¹ (AUTHOR), Schleder, Gabriel Ravanhani² (AUTHOR), Costa Tonoli, Celisa Caldana¹ (AUTHOR), Soprano, Adriana Santos¹ (AUTHOR), Guimarães, Samuel Leite¹ (AUTHOR), Borges, Antonio Carlos² (AUTHOR), Cassago, Alexandre² (AUTHOR), Bajgelman, Marcio Chaim¹ (AUTHOR), Marques, Rafael Elias¹ (AUTHOR), Trivella, Daniela Barretto Barbosa¹ (AUTHOR), Franchini, Kleber Gomes¹ (AUTHOR), Figueira, Ana Carolina Migliorini¹ (AUTHOR), Benedetti, Celso Eduardo¹ (AUTHOR) celso.benedetti@lnbio.cnpem.br, Lopes-de-Oliveira, Paulo Sergio¹ (AUTHOR) celso.benedetti@lnbio.cnpem.br

Publikováno v: PLoS Computational Biology. 5/12/2022, Vol. 18 Issue 5, p1-30. 30p. 1 Black and White Photograph, 4 Diagrams, 2 Graphs.

Binding of modulators to mouse and human multidrug resistance P-glycoprotein. A computational study

Autor: Jara, Gabriel E., Vera, D. Mariano A., Pierini, Adriana B.

Publikováno v: In Journal of Molecular Graphics and Modelling November 2013 46:10-21

Additional file 1 of pyKVFinder: an efficient and integrable Python package for biomolecular cavity detection and characterization in data science

Autor: Guerra, Jo��o Victor da Silva, Ribeiro-Filho, Helder Veras, Jara, Gabriel Ernesto, Bortot, Leandro Oliveira, Pereira, Jos�� Geraldo de Carvalho, Lopes-de-Oliveira, Paulo S��rgio

Additional file 1. The Additional file 1 contains Table A1, Figures A1, A2, A3 and A4, and a detailed description of the molecular dynamics simulation of ADRP domain of SARS-CoV-2 and the benchmarking procedure. Table A1 reports the classes of amino

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7750f65d7a5878e5c44378997148de26

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