Zobrazeno 1 - 10
of 59
pro vyhledávání: '"Jan Grau"'
Autor:
Annett Erkes, René P. Grove, Milena Žarković, Sebastian Krautwurst, Ralf Koebnik, Richard D. Morgan, Geoffrey G. Wilson, Martin Hölzer, Manja Marz, Jens Boch, Jan Grau
Publikováno v:
BMC Genomics, Vol 24, Iss 1, Pp 1-18 (2023)
Abstract Background Most plant-pathogenic Xanthomonas bacteria harbor transcription activator-like effector (TALE) genes, which function as transcriptional activators of host plant genes and support infection. The entire repertoire of up to 29 TALE g
Externí odkaz:
https://doaj.org/article/863e2cf845cc406ea5b8962e0b2474de
Publikováno v:
BMC Genomics, Vol 22, Iss 1, Pp 1-18 (2021)
Abstract Background The yield of many crop plants can be substantially reduced by plant-pathogenic Xanthomonas bacteria. The infection strategy of many Xanthomonas strains is based on transcription activator-like effectors (TALEs), which are secreted
Externí odkaz:
https://doaj.org/article/3fc3ad16efb5420aa14948536ef7f8df
Publikováno v:
Microbiology Spectrum, Vol 10, Iss 2 (2022)
ABSTRACT The genome of the metal-resistant, hydrogen-oxidizing bacterium Cupriavidus metallidurans contains a large number of horizontally acquired plasmids and genomic islands that were integrated into its chromosome or chromid. For the C. metallidu
Externí odkaz:
https://doaj.org/article/acfdb3d588fc4e9b997780cea6cbcae5
Autor:
Giovanna Ambrosini, Ilya Vorontsov, Dmitry Penzar, Romain Groux, Oriol Fornes, Daria D. Nikolaeva, Benoit Ballester, Jan Grau, Ivo Grosse, Vsevolod Makeev, Ivan Kulakovskiy, Philipp Bucher
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-18 (2020)
Abstract Background Positional weight matrix (PWM) is a de facto standard model to describe transcription factor (TF) DNA binding specificities. PWMs inferred from in vivo or in vitro data are stored in many databases and used in a plethora of biolog
Externí odkaz:
https://doaj.org/article/2d492ad437f8494bbf89e6f28ecd6dc1
Publikováno v:
Genome Biology, Vol 20, Iss 1, Pp 1-17 (2019)
Abstract Prediction of cell type-specific, in vivo transcription factor binding sites is one of the central challenges in regulatory genomics. Here, we present our approach that earned a shared first rank in the “ENCODE-DREAM in vivo Transcription
Externí odkaz:
https://doaj.org/article/94feec5567e249bdaca8adad24e3fa2b
Publikováno v:
BMC Bioinformatics, Vol 19, Iss 1, Pp 1-12 (2018)
Abstract Background Genome annotation is of key importance in many research questions. The identification of protein-coding genes is often based on transcriptome sequencing data, ab-initio or homology-based prediction. Recently, it was demonstrated t
Externí odkaz:
https://doaj.org/article/f8b199988b364f129cd702622f83b31d
Publikováno v:
PLoS Computational Biology, Vol 15, Iss 7, p e1007206 (2019)
Plant-pathogenic Xanthomonas bacteria secrete transcription activator-like effectors (TALEs) into host cells, where they act as transcriptional activators on plant target genes to support bacterial virulence. TALEs have a unique modular DNA-binding d
Externí odkaz:
https://doaj.org/article/b38f4973729743ada5c52e693cb8cd0d
Autor:
Stefanie Mücke, Maik Reschke, Annett Erkes, Claudia-Alice Schwietzer, Sebastian Becker, Jana Streubel, Richard D. Morgan, Geoffrey G. Wilson, Jan Grau, Jens Boch
Publikováno v:
Frontiers in Plant Science, Vol 10 (2019)
Rice-pathogenic Xanthomonas oryzae bacteria cause severe harvest loss and challenge a stable food supply. The pathogen virulence relies strongly on bacterial TALE (transcription activator-like effector) proteins that function as transcriptional activ
Externí odkaz:
https://doaj.org/article/5c6a033867a3493f9d385c2ac576a0ca
Publikováno v:
Journal of Manufacturing and Materials Processing, Vol 4, Iss 4, p 111 (2020)
A model Numerical Control (NC) machine tool dynamic compliance is analyzed, including the influence of its mechanical structure and position control feed drive algorithms. The dynamic model of the machine tool is divided into two main parts, which ar
Externí odkaz:
https://doaj.org/article/016f1324d4bc4e2d823ad98b516c1955
Publikováno v:
PLoS ONE, Vol 12, Iss 4, p e0175653 (2017)
[This corrects the article DOI: 10.1371/journal.pone.0173580.].
Externí odkaz:
https://doaj.org/article/0ac21232914248498cf20003ab58201b