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pro vyhledávání: '"Jan, Byska"'
Autor:
Pavol Ulbrich, Manuela Waldner, Katarina Furmanova, Sergio M. Marques, David Bednar, Barbora Kozlikova, Jan Byska
Publikováno v:
IEEE Transactions on Visualization and Computer Graphics
We present sMolBoxes, a dataflow representation for the exploration and analysis of long molecular dynamics (MD) simulations. When MD simulations reach millions of snapshots, a frame-by-frame observation is not feasible anymore. Thus, biochemists rel
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fe8eb300a63407ed17f693844c5359c3
http://arxiv.org/abs/2209.11771
http://arxiv.org/abs/2209.11771
Autor:
Joan Planas-Iglesias, Filip Opaleny, Pavol Ulbrich, Jan Stourac, Zainab Sanusi, Gaspar P Pinto, Andrea Schenkmayerova, Jan Byska, Jiri Damborsky, Barbora Kozlikova, David Bednar
Publikováno v:
Nucleic acids research
The transplantation of loops between structurally related proteins is a compelling method to improve the activity, specificity and stability of enzymes. However, despite the interest of loop regions in protein engineering, the available methods of lo
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2074
Networks of protein-protein interactions (PPI) constitute either stable or transient complexes in every cell. Most of the cellular complexes keep their function, and therefore stay similar, during evolution. The evolutionary constraints preserve most