Zobrazeno 1 - 10
of 25
pro vyhledávání: '"Jamie R. Nuñez"'
Autor:
Yasemin Yesiltepe, Jamie R. Nuñez, Sean M. Colby, Dennis G. Thomas, Mark I. Borkum, Patrick N. Reardon, Nancy M. Washton, Thomas O. Metz, Justin G. Teeguarden, Niranjan Govind, Ryan S. Renslow
Publikováno v:
Journal of Cheminformatics, Vol 10, Iss 1, Pp 1-16 (2018)
Abstract When using nuclear magnetic resonance (NMR) to assist in chemical identification in complex samples, researchers commonly rely on databases for chemical shift spectra. However, authentic standards are typically depended upon to build librari
Externí odkaz:
https://doaj.org/article/75692281a36543aca5bac59c7ba0c124
Autor:
Ryan S. Renslow, Bulbul Ahmed, Jamie R. Nuñez, Bin Cao, Paul D. Majors, Jim K. Fredrickson, Haluk Beyenal
Publikováno v:
Frontiers in Environmental Science, Vol 5 (2017)
In this study, we developed a two-dimensional mathematical model to predict substrate utilization and metabolite production rates in Shewanella oneidensis MR-1 biofilm in the presence and absence of uranium (U). In our model, lactate and fumarate are
Externí odkaz:
https://doaj.org/article/363ae41c33d24a5caf3a8690c484a78f
Autor:
Kevan T. Knizner, Russell R. Kibbe, Kenneth P. Garrard, Jamie R. Nuñez, Christopher R. Anderton, David C. Muddiman
Publikováno v:
J Mass Spectrom
Mass spectrometry imaging (MSI) data visualization relies on heatmaps to show the spatial distribution and measured abundances of molecules within a sample. Non-uniform color gradients such as jet are still commonly used to visualize MSI data, increa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::753dc1e2e7f1684957df41fe979171b3
https://europepmc.org/articles/PMC9944061/
https://europepmc.org/articles/PMC9944061/
Autor:
Amy T. Merrill, Lee-Ping Wang, Arthur S. Edison, Susanta Das, Shunyang Wang, Jesi Lee, Kenneth M. Merz, Ryan S. Renslow, Oliver Fiehn, Thomas O. Metz, Tobias Kind, Dean J. Tantillo, Ricardo Moreira Borges, Sean M. Colby, Jamie R. Nuñez
Publikováno v:
Chemical Reviews. 121:5633-5670
A primary goal of metabolomics studies is to fully characterize the small-molecule composition of complex biological and environmental samples. However, despite advances in analytical technologies over the past two decades, the majority of small mole
Autor:
Jonathan K. Challis, Elin M. Ulrich, Alex Chao, Samanthi Wickramasekara, Alan M. Hood, Katherine T. Peter, Jon R. Sobus, Natalia Quinete, Allison L. Phillips, Andrew D. McEachran, Brian Ng, Bowen Du, Jamie R. Nuñez, Seth Newton, Kristin Favela, Sara L. Nason, Yong-Lai Feng, Antony J. Williams, Benjamin J. Place, Ryan S. Renslow, Benedikt Warth, Eric M. Sussman, Ann M. Knolhoff, Piero R. Gardinali, Christine M. Fisher
Publikováno v:
Anal Chem
Non-targeted analysis (NTA) encompasses a rapidly evolving set of mass spectrometry techniques aimed at characterizing the chemical composition of complex samples, identifying unknown compounds, and/or classifying samples, without prior knowledge reg
Autor:
Christine H. Chang, Evangelina Brayfindley, Jamie R. Nuñez, Sean M. Colby, Madison R. Blumer, Thomas O. Metz, Ryan S. Renslow
Publikováno v:
J Chem Inf Model
We describe the Mass Spectrometry Adduct Calculator (MSAC), an automated Python tool to calculate the adduct ion masses of a parent molecule. Here, adduct refers to a version of a parent molecule [M] that is charged due to addition or loss of atoms a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e06c91aebc38bfa245be646400adfd9c
https://europepmc.org/articles/PMC9529534/
https://europepmc.org/articles/PMC9529534/
Publikováno v:
J Chem Inf Model
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e84533ac7d5b89847aef957b555d63c8
https://europepmc.org/articles/PMC9670155/
https://europepmc.org/articles/PMC9670155/
Autor:
Ryan S. Renslow, Elin M. Ulrich, Jon R. Sobus, Jamie R. Nuñez, Sean M. Colby, Malak M. Tfaily, Justin G. Teeguarden, Dennis G. Thomas, Nikola Tolić, Thomas O. Metz
Publikováno v:
Journal of Chemical Information and Modeling. 59:4052-4060
The current gold standard for unambiguous molecular identification in metabolomics analysis is comparing two or more orthogonal properties from the analysis of authentic reference materials (standa...
Autor:
P. Ilhardt, Joshua J. Rosnow, Elizabeth H. Denis, Jamie R. Nuñez, Ryan S. Renslow, Eirik J. Krogstad, James J. Moran
Publikováno v:
Soil Biology and Biochemistry. 131:119-132
Understanding the complex chemical nature of root-soil interactions is essential for building the next generation of sustainable agricultural systems and facilitating long-term environmental remediation strategies. Techniques currently suited to inve
Autor:
Justin G. Teeguarden, Dennis G. Thomas, Niranjan Govind, Ryan S. Renslow, Joseph Brown, Sean M. Colby, Kurt R. Glaesemann, Douglas J. Baxter, Jamie R. Nuñez, Meg Pirrung, Thomas O. Metz
Publikováno v:
Analytical Chemistry. 91:4346-4356
High-throughput, comprehensive, and confident identifications of metabolites and other chemicals in biological and environmental samples will revolutionize our understanding of the role these chemically diverse molecules play in biological systems. D