Zobrazeno 1 - 10
of 44
pro vyhledávání: '"James F. Kolonay"'
Autor:
Martin Wu, Qinghu Ren, A. Scott Durkin, Sean C Daugherty, Lauren M Brinkac, Robert J Dodson, Ramana Madupu, Steven A Sullivan, James F Kolonay, Daniel H Haft, William C Nelson, Luke J Tallon, Kristine M Jones, Luke E Ulrich, Juan M Gonzalez, Igor B Zhulin, Frank T Robb, Jonathan A Eisen
Publikováno v:
PLoS Genetics, Vol 2, Iss 4 (2006)
Externí odkaz:
https://doaj.org/article/683d38255c424fc7bd665d96d62b1484
Autor:
Martin Wu, Qinghu Ren, A Scott Durkin, Sean C Daugherty, Lauren M Brinkac, Robert J Dodson, Ramana Madupu, Steven A Sullivan, James F Kolonay, Daniel H Haft, William C Nelson, Luke J Tallon, Kristine M Jones, Luke E Ulrich, Juan M Gonzalez, Igor B Zhulin, Frank T Robb, Jonathan A Eisen
Publikováno v:
PLoS Genetics, Vol 1, Iss 5, p e65 (2005)
We report here the sequencing and analysis of the genome of the thermophilic bacterium Carboxydothermus hydrogenoformans Z-2901. This species is a model for studies of hydrogenogens, which are diverse bacteria and archaea that grow anaerobically util
Externí odkaz:
https://doaj.org/article/a452bdfa5c1649a6821371d34f611950
Autor:
Martin Wu, Ling V Sun, Jessica Vamathevan, Markus Riegler, Robert Deboy, Jeremy C Brownlie, Elizabeth A McGraw, William Martin, Christian Esser, Nahal Ahmadinejad, Christian Wiegand, Ramana Madupu, Maureen J Beanan, Lauren M Brinkac, Sean C Daugherty, A Scott Durkin, James F Kolonay, William C Nelson, Yasmin Mohamoud, Perris Lee, Kristi Berry, M Brook Young, Teresa Utterback, Janice Weidman, William C Nierman, Ian T Paulsen, Karen E Nelson, Hervé Tettelin, Scott L O'Neill, Jonathan A Eisen
Publikováno v:
PLoS Biology, Vol 2, Iss 3, p E69 (2004)
The complete sequence of the 1,267,782 bp genome of Wolbachia pipientis wMel, an obligate intracellular bacteria of Drosophila melanogaster, has been determined. Wolbachia, which are found in a variety of invertebrate species, are of great interest d
Externí odkaz:
https://doaj.org/article/8efc105c227a47e0b3a4d49569ca57c9
Autor:
Eugene Melamud, Barbara A. Methé, Xijun Zhang, Tamara Feldblyum, Steven A. Sullivan, Robert J. Dodson, Ramana Madupu, Adrienne L. Huston, Tanja M. Davidsen, Bruce Weaver, Anthony S. Durkin, Martin Wu, Robert T. DeBoy, Janice Weidman, Liwei Zhou, John Moult, William C. Nelson, Claire M. Fraser, Karen E. Nelson, Lauren M. Brinkac, Sean C. Daugherty, Bahram Momen, James F. Kolonay, Jody W. Deming, Hoda Khouri, Matthew R. Lewis, T. Utterback
Publikováno v:
Proceedings of the National Academy of Sciences. 102:10913-10918
The completion of the 5,373,180-bp genome sequence of the marine psychrophilic bacterium Colwellia psychrerythraea 34H, a model for the study of life in permanently cold environments, reveals capabilities important to carbon and nutrient cycling, bio
Autor:
Kevin Tran, Hoda Khouri, Robert T. DeBoy, Karen E. Nelson, Steven A. Sullivan, Stephen H. Zinder, Marjorie Impraim, William C. Nelson, Derrick E. Fouts, John F. Heidelberg, Ramana Madupu, James F. Kolonay, Adam M. Phillippy, Naomi L. Ward, Jonathan A. Eisen, Sean C. Daugherty, Heather Forberger, Robert J. Dodson, Claire M. Fraser, Lauren M. Brinkac, Rekha Seshadri, Lorenz Adrian, Barbara A. Methé, Jeffrey M. Robinson, Katherine H. Kang
Publikováno v:
Science (New York, N.Y.), vol 307, iss 5706
Dehalococcoides ethenogenes is the only bacterium known to reductively dechlorinate the groundwater pollutants, tetrachloroethene (PCE) and trichloroethene, to ethene. Its 1,469,720âbase pair chromosome contains large dynamic duplicated regions
Autor:
Tanja Davidsen, Robert J. Dodson, Hervé Tettelin, Michelle L. Gwinn, James F. Kolonay, Diana Radune, A. Scott Durkin, David DeShazer, Yan Yu, Jeremy D. Selengut, Karen E. Nelson, Saul H Sarria, Daniel H. Haft, Yasmin Mohammoud, Sean C. Daugherty, Lauren M. Brinkac, Owen White, Claire M. Fraser, Robert T. DeBoy, Catherine M. Ronning, George Dimitrov, Hoda Khouri, Nikhat Zafar, Christine Shamblin, Liwei Zhou, Steven A. Sullivan, William C. Nelson, H. Stanley Kim, Ramana Madupu, Claudia M. Romero, Ricky L. Ulrich, Tamara Feldblyum, William C. Nierman
Publikováno v:
Proceedings of the National Academy of Sciences. 101:14246-14251
The complete genome sequence of Burkholderia mallei ATCC 23344 provides insight into this highly infectious bacterium's pathogenicity and evolutionary history. B. mallei , the etiologic agent of glanders, has come under renewed scientific investigati
Autor:
David A. Rasko, Nadia Fedorova, John B. Luchansky, Laura D. Wonderling, Derrick E. Fouts, A. Scott Durkin, Robert J. Dodson, Samuel V. Angiuoli, Sophia Kathariou, William C. Nelson, Robert T. DeBoy, Bao Tran, Jacques Ravel, Darrell O. Bayles, Steven R. Gill, Owen White, Sean C. Daugherty, Heather Forberger, Ian T. Paulsen, William C. Nierman, Susan Van Aken, Gaylen A. Uhlich, Daniel H. Haft, Jeremy Peterson, Jeremy D. Selengut, Hoda Khouri, Claire M. Fraser, Maureen J. Beanan, Lauren M. Brinkac, James F. Kolonay, Karen E. Nelson, Emmanuel F. Mongodin, Ramana Madupu
Publikováno v:
Nucleic Acids Research. 32:2386-2395
The genomes of three strains of Listeria monocytogenes that have been associated with food-borne illness in the USA were subjected to whole genome comparative analysis. A total of 51, 97 and 69 strain-specific genes were identified in L.monocytogenes
Autor:
Jonathan A. Eisen, George Dimitrov, Naomi L. Ward, A. Scott Durkin, Kevin Tran, Barbara A. Methé, Robert J. Dodson, Sean C. Daugherty, Tanja M. Davidsen, Robert T. DeBoy, Shelley A. Haveman, T. Utterback, Jeremy Peterson, James F. Kolonay, Derrick E. Fouts, Nikhat Zafar, Diana Radune, Claire M. Fraser, Rekha Seshadri, Mark Hance, Gerrit Voordouw, Daniel H. Haft, Ramana Madupu, Ian T. Paulsen, Christopher L. Hemme, Hoda Khouri, William C. Nelson, Steven A. Sullivan, Jeremy D. Selengut, John Gill, Lauren M. Brinkac, John F. Heidelberg, Liwei Zhou, Judy D. Wall, Tamara Feldblyum
Publikováno v:
Nature Biotechnology. 22:554-559
Desulfovibrio vulgaris Hildenborough is a model organism for studying the energy metabolism of sulfate-reducing bacteria (SRB) and for understanding the economic impacts of SRB, including biocorrosion of metal infrastructure and bioremediation of tox
Autor:
Hong Dong, Luke J. Tallon, David Granger, Jamie L. Galvin, Jessica Gray, Derrick E. Fouts, Tanya Mason, Robert D. Fleischmann, Robert T. DeBoy, Ian T. Paulsen, Karen E. Nelson, Hervé Tettelin, William C. Nelson, Floyd E. Dewhirst, Claire M. Fraser, Daniel H. Haft, Jonathan A. Eisen, Robert J. Dodson, Sean C. Daugherty, Michelle L. Gwinn, James F. Kolonay, Margaret J. Duncan, A. Scott Durkin
Publikováno v:
Journal of Bacteriology. 185:5591-5601
The complete 2,343,479-bp genome sequence of the gram-negative, pathogenic oral bacterium Porphyromonas gingivalis strain W83, a major contributor to periodontal disease, was determined. Whole-genome comparative analysis with other available complete
Autor:
Alan Collmer, Liwei Zhou, Jia Liu, Nikhat Zafar, Bao Tran, William C. Nelson, Kristi Berry, Magdalen Lindeberg, Wen Ling Deng, Nadia Fedorova, David J. Schneider, Hoda Khouri, Daniel A. Russell, Owen White, Mark D'Ascenzo, Vinita Joardar, Tamara Feldblyum, Carol L. Bender, Terrence P. Delaney, C. Robin Buell, Jeremy D. Selengut, Gregory B. Martin, Samuel W. Cartinhour, Arun K. Chatterjee, Robert T. DeBoy, Robert J. Dodson, Sondra G. Lazarowitz, James R. Alfano, Daniel H. Haft, Lauren M. Brinkac, Sean C. Daugherty, Adela R. Ramos, Ian T. Paulsen, Qiaoping Yuan, Michelle L. Gwinn, James F. Kolonay, Ramana Madupu, Xiaoyan Tang, Maureen J. Beanan, A. Scott Durkin, Claire M. Fraser, Tanja M. Davidsen, Teresa Utterback, Susan Van Aken
Publikováno v:
Proceedings of the National Academy of Sciences. 100:10181-10186
We report the complete genome sequence of the model bacterial pathogen Pseudomonas syringae pathovar tomato DC3000 (DC3000), which is pathogenic on tomato and Arabidopsis thaliana . The DC3000 genome (6.5 megabases) contains a circular chromosome and