Zobrazeno 1 - 10
of 169
pro vyhledávání: '"James C, Carrington"'
Autor:
Kira M. Veley, Kiona Elliott, Greg Jensen, Zhenhui Zhong, Suhua Feng, Marisa Yoder, Kerrigan B. Gilbert, Jeffrey C. Berry, Zuh-Jyh Daniel Lin, Basudev Ghoshal, Javier Gallego-Bartolomé, Joanna Norton, Sharon Motomura-Wages, James C. Carrington, Steven E. Jacobsen, Rebecca S. Bart
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-9 (2023)
Activating the expression of host susceptibility (S) genes is one of the strategies plant pathogens employed to promote infection of their host. Here, the authors show that targeted methylation at the TAL20 effector binding element of the cassava SWE
Externí odkaz:
https://doaj.org/article/e7d105312d684276a6638467e05b4c57
Publikováno v:
PLoS ONE, Vol 14, Iss 7, p e0219207 (2019)
The distribution and diversity of RNA viruses in fungi is incompletely understood due to the often cryptic nature of mycoviral infections and the focused study of primarily pathogenic and/or economically important fungi. As most viruses that are know
Externí odkaz:
https://doaj.org/article/3c89e8d8f109454bafd90f64c89f2b49
Publikováno v:
PLoS Pathogens, Vol 12, Iss 6, p e1005640 (2016)
Even though the fungal kingdom contains more than 3 million species, little is known about the biological roles of RNA silencing in fungi. The Colletotrichum genus comprises fungal species that are pathogenic for a wide range of crop species worldwid
Externí odkaz:
https://doaj.org/article/cd19929c83124f5db78e75777d99bc7a
Autor:
Hernan Garcia-Ruiz, Alberto Carbonell, J Steen Hoyer, Noah Fahlgren, Kerrigan B Gilbert, Atsushi Takeda, Annalisa Giampetruzzi, Mayra T Garcia Ruiz, Michaela G McGinn, Nicholas Lowery, Maria T Martinez Baladejo, James C Carrington
Publikováno v:
PLoS Pathogens, Vol 11, Iss 3, p e1004755 (2015)
In eukaryotes, ARGONAUTE proteins (AGOs) associate with microRNAs (miRNAs), short interfering RNAs (siRNAs), and other classes of small RNAs to regulate target RNA or target loci. Viral infection in plants induces a potent and highly specific antivir
Externí odkaz:
https://doaj.org/article/f6d7201f8d13414288fde8fb70db5ef7
Publikováno v:
Plant Physiology. 180:1418-1435
RNA-based silencing functions as an important antiviral immunity mechanism in plants. Plant viruses evolved to encode viral suppressors of RNA silencing (VSRs) that interfere with the function of key components in the silencing pathway. As effectors
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::007283f6dd9d8050e0dc80e23a07bf2e
https://doi.org/10.1104/pp.19.00121
https://doi.org/10.1104/pp.19.00121
Autor:
Noah Fahlgren, Stephanie R Bollmann, Kristin D Kasschau, Josh T Cuperus, Caroline M Press, Christopher M Sullivan, Elisabeth J Chapman, J Steen Hoyer, Kerrigan B Gilbert, Niklaus J Grünwald, James C Carrington
Publikováno v:
PLoS ONE, Vol 8, Iss 10, p e77181 (2013)
In eukaryotes, RNA silencing pathways utilize 20-30-nucleotide small RNAs to regulate gene expression, specify and maintain chromatin structure, and repress viruses and mobile genetic elements. RNA silencing was likely present in the common ancestor
Externí odkaz:
https://doaj.org/article/68fe18051f16492cb2f785544f587b9d
Autor:
Sylvia E J Fischer, Taiowa A Montgomery, Chi Zhang, Noah Fahlgren, Peter C Breen, Alexia Hwang, Christopher M Sullivan, James C Carrington, Gary Ruvkun
Publikováno v:
PLoS Genetics, Vol 7, Iss 11, p e1002369 (2011)
Endogenous small interfering RNAs (siRNAs) are a class of naturally occuring regulatory RNAs found in fungi, plants, and animals. Some endogenous siRNAs are required to silence transposons or function in chromosome segregation; however, the specific
Externí odkaz:
https://doaj.org/article/51e9ea26caa74dd09c4adc58ba7a5093
Autor:
Jason S Cumbie, Jeffrey A Kimbrel, Yanming Di, Daniel W Schafer, Larry J Wilhelm, Samuel E Fox, Christopher M Sullivan, Aron D Curzon, James C Carrington, Todd C Mockler, Jeff H Chang
Publikováno v:
PLoS ONE, Vol 6, Iss 10, p e25279 (2011)
GENE-counter is a complete Perl-based computational pipeline for analyzing RNA-Sequencing (RNA-Seq) data for differential gene expression. In addition to its use in studying transcriptomes of eukaryotic model organisms, GENE-counter is applicable for
Externí odkaz:
https://doaj.org/article/918cec6e8d7f40b286224d18ba6e665c
Autor:
Taiyun Wei, Changwei Zhang, Jian Hong, Ruyi Xiong, Kristin D Kasschau, Xueping Zhou, James C Carrington, Aiming Wang
Publikováno v:
PLoS Pathogens, Vol 6, Iss 6, p e1000962 (2010)
Intercellular transport of viruses through cytoplasmic connections, termed plasmodesmata (PD), is essential for systemic infection in plants by viruses. Previous genetic and ultrastructural data revealed that the potyvirus cyclindrical inclusion (CI)
Externí odkaz:
https://doaj.org/article/46baadb29b084ec189656c9171f09d8a
Autor:
Kristin D Kasschau, Noah Fahlgren, Elisabeth J Chapman, Christopher M Sullivan, Jason S Cumbie, Scott A Givan, James C Carrington
Publikováno v:
PLoS Biology, Vol 5, Iss 3, p e57 (2007)
Eukaryotes contain a diversified set of small RNA-guided pathways that control genes, repeated sequences, and viruses at the transcriptional and posttranscriptional levels. Genome-wide profiles and analyses of small RNAs, particularly the large class
Externí odkaz:
https://doaj.org/article/3fa6d55c9c294f5e9cbaabdab930f754