Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Jakkula, LR"'
Autor:
Daemen, A, Griffith, OL, Heiser, LM, Wang, NJ, Enache, OM, Sanborn, Z, Pepin, F, Durinck, S, Korkola, JE, Griffith, M, Hur, JS, Huh, N, Chung, J, Cope, L, Fackler, MJ, Umbricht, C, Sukumar, S, Seth, P, Sukhatme, VP, Jakkula, LR, Lu, Y, Mills, GB, Cho, RJ, Collisson, EA, van't Veer, LJ, Spellman, PT, Gray, JW
Publikováno v:
Daemen, A; Griffith, OL; Heiser, LM; Wang, NJ; Enache, OM; Sanborn, Z; et al.(2015). Erratum to Modeling precision treatment of breast cancer [Genome Biology, 14, (2013), R110]. Genome Biology, 16(1). doi: 10.1186/s13059-015-0658-5. UC San Francisco: Retrieved from: http://www.escholarship.org/uc/item/47h337rw
© 2015 Daemen et al.; licensee BioMed Central. During the type-setting of the final version of the article [1] some of the additional files were swapped. The correct files are republished in this Erratum.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::2f8e902c131195601f783e880239b4e7
http://www.escholarship.org/uc/item/47h337rw
http://www.escholarship.org/uc/item/47h337rw
Autor:
Van 'T Veer, Laura, Ashworth, Alan, Daemen, A, Wolf, DM, Korkola, JE, Griffith, OL, Frankum, JR, Brough, R, Jakkula, LR, Wang, NJ, Natrajan, R, Reis-Filho, JS
Publikováno v:
Van 'T Veer, Laura; Ashworth, Alan; Daemen, A; Wolf, DM; Korkola, JE; Griffith, OL; et al.(2012). Cross-platform pathway-based analysis identifies markers of response to the PARP inhibitor olaparib. UC San Francisco: Retrieved from: http://www.escholarship.org/uc/item/3b99265r
Poly(ADP-ribose) polymerase (PARP) is an enzyme involved in DNA repair. PARP inhibitors can act as chemosensitizers, or operate on the principle of synthetic lethality when used as single agent. Clinical trials have shown drugs in this class to be pr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::0568eda800d87a1f174ad5219d818921
http://www.escholarship.org/uc/item/3b99265r
http://www.escholarship.org/uc/item/3b99265r
Autor:
Bell, D, Berchuck, A, Birrer, M, Chien, J, Cramer, DW, Dao, F, Dhir, R, DiSaia, P, Gabra, H, Glenn, P, Godwin, AK, Triche, T, Berman, BP, Van den Berg, DJ, Buckley, J, Baylin, SB, Zhang, J, Spellman, PT, Purdom, E, Iacocca, M, Shelton, T, Voet, D, Neuvial, P, Bengtsson, H, Jakkula, LR, Durinck, S, Han, J, Dorton, S, Marr, H, Zhang, H, Choi, YG, Wang, V, Wilkinson, J, Nguyen, H, Wang, NJ, Imielinski, M, Ngai, J, Conboy, JG, Parvin, B, Feiler, HS, Speed, TP, Gray, JW, Wu, CJ, Bloom, T, Levine, DA, Li, L, Socci, ND, Liang, Y, Taylor, BS, Kalloger, S, Schultz, N, Borsu, L, Lash, AE, Brennan, C, Ardlie, K, Viale, A, Shukla, S, Grimm, D, Sander, C, Ladanyi, M, Hoadley, KA, Meng, S, Du, Y, Karlan, BY, Shi, Y, Fennell, T, Cibulskis, K, Lawrence, MS, Meyerson, M, Hatfield, M, Mills, GB, Sivachenko, A, Jing, R, Park, RW, Liu, Y, Park, PJ, Ramos, AH, Noble, M, Chin, L, Carter, H, Kim, D, Morris, S, Winckler, W, Karchin, R, Morrison, C, Baldwin, J, Korkola, JE, Yena, P, Heiser, LM, Getz, G, Cho, RJ, Hu, Z, Gabriel, S, Mutch, D, Cerami, E, Rhodes, P, Olshen, A, Verhaak, RGW, Lander, ES, Reva, B, Antipin, Y, Shen, R, Olvera, N, Mankoo, P, Sheridan, R, Ciriello, G, Sherman, M, Chang, WK, Bernanke, JA, Hayes, DN, Carter, SL, Haussler, D, Orsulic, S, Benz, CC, Paulauskis, J, Stuart, JM, Zhang, N, Benz, SC, Sanborn, JZ, Vaske, CJ, Mermel, CH, Zhu, J, Szeto, C, Scott, GK, Yau, C, Rabeno, B, Ding, L, Park, K, Balu, S, Perou, CM, Saksena, G, Wilkerson, MD, Millis, S, Kahn, A, Turman, YJ, Fulton, RS, Onofrio, RC, Greene, JM, Sfeir, R, Jensen, MA, Chen, J, Whitmore, J, Alonso, S, Jordan, J, Chu, A, Rader, JS, Koboldt, DC, Zang, D, Gross, J, Barker, A, Compton, C, Eley, G, Ferguson, M, Fielding, P, Gerhard, DS, Myles, R, McLellan, MD, Schaefer, C, Helms, EB, Shaw, KRM, Sikic, BI, Vaught, J, Vockley, JB, Good, PJ, Guyer, MS, Ozenberger, B, Wylie, T, Peterson, J, Thomson, E, Smith-McCune, K, Sood, AK, Bowtell, D, Hubbard, D, Penny, R, Testa, JR, Chang, K, Walker, J, Dinh, HH, Drummond, JA, Fowler, G, Zhou, X, Gunaratne, P, Hawes, AC, Kovar, CL, Lewis, LR, Gupta, S, Morgan, MB, O'Laughlin, M, Newsham, IF, Santibanez, J, Reid, JG, Trevino, LR, Wu, J, Wu, Y-Q, Wang, M, Muzny, DM, Wheeler, DA, Gibbs, RA, Crenshaw, A, Sivachenko, AY, Topal, MD, Sougnez, C, Dooling, DJ, Fulton, L, Akbani, R, Abbott, R, Dees, ND, Zhang, Q, Kandoth, C, Wendl, M, Schierding, W, Shen, D, Harris, CC, Baggerly, KA, Schmidt, H, Wilson, RK, Kalicki, J, Delehaunty, KD, Fronick, CC, Demeter, R, Cook, L, Wallis, JW, Lin, L, Magrini, VJ, Yung, WK, Hodges, JS, Protopopov, A, Eldred, JM, Smith, SM, Pohl, CS, Vandin, F, Raphael, BJ, Weinstock, GM, Mardis, R, Kim, TM, Hartmann, L, Perna, I, Xiao, Y, Ren, G, Sathiamoorthy, N, Petrelli, N, Lee, E, Kucherlapati, R, Absher, DM, Huang, M, Waite, L, Sherlock, G, Brooks, JD, Li, JZ, Weinstein, JN, Xu, J, Myers, RM, Laird, PW, Cope, L, Herman, JG, Shen, H, Huntsman, DG, Weisenberger, DJ, Noushmehr, H, Pan, F
Publikováno v:
PMC
Nature
Nature
A catalogue of molecular aberrations that cause ovarian cancer is critical for developing and deploying therapies that will improve patients’ lives. The Cancer Genome Atlas project has analysed messenger RNA expression, microRNA expression, promote
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5a525d87ace4cdaf0efff1d814bd60d0
http://hdl.handle.net/1721.1/74091
http://hdl.handle.net/1721.1/74091
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Akademický článek
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Autor:
Daemen A; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. daemena@gene.com.; Laboratory Medicine, University of California San Francisco, San Francisco, CA, 94115, USA. daemena@gene.com.; Present address: Department of Bioinformatics & Computational Biology, Genentech Inc, 1 DNA Way, South San Francisco, CA, 94080, USA. daemena@gene.com., Griffith OL; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. ogriffit@genome.wustl.edu.; Department of Molecular and Medical Genetics, Oregon Health and Science University, Portland, OR, 97239, USA. ogriffit@genome.wustl.edu.; The Genome Institute, Washington University School of Medicine, St Louis, MO, 63105, USA. ogriffit@genome.wustl.edu., Heiser LM; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. heiserl@ohsu.edu.; Department of Biomedical Engineering, Center for Spatial Systems Biomedicine, Knight Cancer Institute, Oregon Health and Science University, Portland, OR, 97239, USA. heiserl@ohsu.edu., Wang NJ; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. wangnic@ohsu.edu.; Department of Biomedical Engineering, Center for Spatial Systems Biomedicine, Knight Cancer Institute, Oregon Health and Science University, Portland, OR, 97239, USA. wangnic@ohsu.edu., Enache OM; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. oenache@berkeley.edu., Sanborn Z; Five3 genomics, 101 Cooper St, Santa Cruz, CA, 95060, USA. zack@five3genomics.com., Pepin F; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. francois.pepin@sequenta.com.; Present address: Sequenta Inc, South San Francisco, CA, 94080, USA. francois.pepin@sequenta.com., Durinck S; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. sdurinck@gmail.com., Korkola JE; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. korkola@ohsu.edu.; Department of Biomedical Engineering, Center for Spatial Systems Biomedicine, Knight Cancer Institute, Oregon Health and Science University, Portland, OR, 97239, USA. korkola@ohsu.edu., Griffith M; The Genome Institute, Washington University School of Medicine, St Louis, MO, 63105, USA. mgriffit@genome.wustl.edu., Hur JS; Samsung Electronics Headquarters, Seocho-gu, Seoul, 137-857, Korea. joe.hur@samsung.com., Huh N; Emerging Technology Research Center, Samsung Advanced Institute of Technology, Kyunggi-do, 446-712, Korea. namhuh@samsung.com., Chung J; Emerging Technology Research Center, Samsung Advanced Institute of Technology, Kyunggi-do, 446-712, Korea. doogie.chung@samsung.com., Cope L; Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA. Lcope1@jhmi.edu., Fackler MJ; Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA. facklma@jhmi.edu., Umbricht C; Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA. cumbrich@jhmi.edu., Sukumar S; Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA. saras@jhmi.edu., Seth P; Department of Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA. pseth@bidmc.harvard.edu., Sukhatme VP; Department of Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA. vsukhatm@bidmc.harvard.edu., Jakkula LR; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. lrjk@hotmail.com., Lu Y; Department of Systems Biology, MD Anderson Cancer Center, Houston, TX, 77030, USA. yilinglu@mdanderson.org., Mills GB; Department of Systems Biology, MD Anderson Cancer Center, Houston, TX, 77030, USA. gmills@mdanderson.org., Cho RJ; Department of Dermatology, University of California, San Francisco, CA, 94115, USA. choR@derm.ucsf.edu., Collisson EA; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. Eric.Collisson@ucsf.edu.; Laboratory Medicine, University of California San Francisco, San Francisco, CA, 94115, USA. Eric.Collisson@ucsf.edu., Van't Veer LJ; Laboratory Medicine, University of California San Francisco, San Francisco, CA, 94115, USA. VantveerL@cc.ucsf.edu., Spellman PT; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. spellmap@ohsu.edu.; Department of Molecular and Medical Genetics, Oregon Health and Science University, Portland, OR, 97239, USA. spellmap@ohsu.edu., Gray JW; Department of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. grayjo@ohsu.edu.; Department of Biomedical Engineering, Center for Spatial Systems Biomedicine, Knight Cancer Institute, Oregon Health and Science University, Portland, OR, 97239, USA. grayjo@ohsu.edu.
Publikováno v:
Genome biology [Genome Biol] 2015 May 12; Vol. 16, pp. 95. Date of Electronic Publication: 2015 May 12.
Autor:
Daemen A, Griffith OL, Heiser LM, Wang NJ, Enache OM, Sanborn Z, Pepin F, Durinck S, Korkola JE, Griffith M, Hur JS, Huh N, Chung J, Cope L, Fackler MJ, Umbricht C, Sukumar S, Seth P, Sukhatme VP, Jakkula LR, Lu Y, Mills GB, Cho RJ, Collisson EA, van't Veer LJ, Spellman PT, Gray JW
Publikováno v:
Genome biology [Genome Biol] 2013; Vol. 14 (10), pp. R110.
Cross-platform pathway-based analysis identifies markers of response to the PARP inhibitor olaparib.
Autor:
Daemen A; Laboratory Medicine, University of California San Francisco, 2340 Sutter Street Box 0808, San Francisco, CA 94115, USA. anneleen.daemen@gmail.com, Wolf DM, Korkola JE, Griffith OL, Frankum JR, Brough R, Jakkula LR, Wang NJ, Natrajan R, Reis-Filho JS, Lord CJ, Ashworth A, Spellman PT, Gray JW, van't Veer LJ
Publikováno v:
Breast cancer research and treatment [Breast Cancer Res Treat] 2012 Sep; Vol. 135 (2), pp. 505-17. Date of Electronic Publication: 2012 Aug 09.