Zobrazeno 1 - 10
of 23
pro vyhledávání: '"Jair S. García-Sotelo"'
Autor:
Paloma Lara, Socorro Gama-Castro, Heladia Salgado, Claire Rioualen, Luis J. Muñiz-Rascado, Jair S. García-Sotelo, Víctor H. Tierrafría, Julio Collado-Vides
Publikováno v:
bioRxiv
Genomics has strongly increased the available experimental strategies to identify the elements involved in regulatory networks, particularly those of the regulation of transcription initiation. As new methodologies emerge, a natural step is to compar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bb15dc4ff2e00372383eb0f52daafb8a
https://europepmc.org/articles/PMC10168212/
https://europepmc.org/articles/PMC10168212/
Autor:
Margarita Flores, Alejandra Castillo, Margareta Boege, Jair S. García-Sotelo, Guillermo Dávila, Lucia Morales, Carina Uribe, Rafael Palacios, Kim Palacios-Flores
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America
Significance The accuracy of the nucleotide sequence of genomes is of utmost importance. The Perfect Match Genomic Landscape (PMGL) is a precise, sensitive, and nonstatistical strategy to detect genome variation. We used this strategy to refine refer
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::727b7996c8595f72206c9f4658cfbbeb
http://europepmc.org/articles/PMC8040819
http://europepmc.org/articles/PMC8040819
Autor:
Marco Moretto, Adrián Munguía-Reyes, Alejandra Zayas-Del Moral, Luis A. Aguilar, Yalbi I. Balderas-Martínez, Yair Romero, Mariel Maldonado, Julio Collado-Vides, Alejandra Medina-Rivera, Ana B. Villaseñor-Altamirano, Kristof Engelen, Jair S. García-Sotelo, Aldana-Assad Oscar, Moisés Selman
Publikováno v:
Scientific Reports, Vol 10, Iss 1, Pp 1-9 (2020)
Scientific Reports
Scientific Reports
Chronic Obstructive Pulmonary Disease (COPD) and Idiopathic Pulmonary Fibrosis (IPF) have contrasting clinical and pathological characteristics, and interesting whole-genome transcriptomic profiles. However, data from public repositories are difficul
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c0fb34c2bd7d6201b4e085dea9bee340
https://doi.org/10.1038/s41598-019-56339-5
https://doi.org/10.1038/s41598-019-56339-5
Autor:
Laura Gómez-Romero, Margareta Boege, Lucia Morales, Jair S. García-Sotelo, Luis A. Aguilar, Alejandra Castillo, José L. Reyes, Carina Uribe, Kim Palacios-Flores, Alejandro Garciarubio, Guillermo Dávila
Publikováno v:
Genetics
At the heart of genomics lies the precise determination of an organism’s DNA sequence. Palacios-Flores et al. present a simple, sensitive, precise, and essentially non-statistical solution for generating genome-wide variation profiles and refining
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::73d42e6691d448648c8b97cb1e531163
https://doi.org/10.1534/genetics.117.300589
https://doi.org/10.1534/genetics.117.300589
Autor:
Raul Ossio, David J. Adams, Jair S. García-Sotelo, O. Isaac Garcia-Salinas, Luis A. Aguilar, Diego Said Anaya-Mancilla, Carla Daniela Robles-Espinoza
Publikováno v:
Bioinformatics
Motivation Identifying disease-causing variants from exome sequencing projects remains a challenging task that often requires bioinformatics expertise. Here we describe a user-friendly graphical application that allows medical professionals and bench
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f3e6bd2649cc26833106f3ebbf65bc91
http://europepmc.org/articles/PMC6853650
http://europepmc.org/articles/PMC6853650
Autor:
O. Isaac Garcia-Salinas, Luis A. Aguilar, Diego Said Anaya-Mancilla, David J. Adams, Carla Daniela Robles-Espinoza, Raul Ossio, Jair S. García-Sotelo
PurposeTo create a user-friendly web application that allows researchers, medical professionals and patients to easily and securely view, filter and interact with human exome sequencing data in the Variant Call Format (VCF).MethodsWe have created VCF
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5b51c0f18e436ff2bf0bb980974ffca0
Autor:
James E. Galagan, Cecilia Ishida-Gutiérrez, Julio Collado-Vides, Socorro Gama-Castro, Kevin Alquicira-Hernández, César Bonavides-Martínez, Jair S. García-Sotelo, Alberto Santos-Zavaleta, Heladia Salgado, Luis Muñiz-Rascado, David A. Velázquez-Ramírez, Laura Gómez-Romero, Víctor Del Moral-Chávez, Carlos-Francisco Méndez-Cruz, Mishael Sánchez-Pérez, Pablo Peña-Loredo, Daniela Ledezma-Tejeida
Publikováno v:
Nucleic Acids Research
RegulonDB, first published 20 years ago, is a comprehensive electronic resource about regulation of transcription initiation of Escherichia coli K-12 with decades of knowledge from classic molecular biology experiments, and recently also from high-th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::110e2d03ec9378fc567540767d3b1846
https://pubmed.ncbi.nlm.nih.gov/30395280
https://pubmed.ncbi.nlm.nih.gov/30395280
Autor:
Heladia Salgado, Alejandra López-Fuentes, Alejandra Medina-Rivera, Kevin Alquicira-Hernández, Jair S. García-Sotelo, Liliana Porrón-Sotelo, Lucia Pannier, Julio Collado-Vides, Socorro Gama-Castro, Luis Muñiz-Rascado, Alberto Santos-Zavaleta, Irma Martínez-Flores, Ernesto Pérez-Rueda, Jaime A. Castro-Mondragon, Shirley Alquicira-Hernández, Daniela Ledezma-Tejeida, Fabio Rinaldi, César Bonavides-Martínez, Anastasia Hernández-Koutoucheva, Víctor Del Moral-Chávez, Hilda Solano-Lira
Publikováno v:
Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2016, 44 (D1), pp.D133-D143. ⟨10.1093/nar/gkv1156⟩
Nucleic Acids Research, 2016, 44 (D1), pp.D133-D143. ⟨10.1093/nar/gkv1156⟩
Nucleic Acids Research, Oxford University Press, 2016, 44 (D1), pp.D133-D143. ⟨10.1093/nar/gkv1156⟩
Nucleic Acids Research, 2016, 44 (D1), pp.D133-D143. ⟨10.1093/nar/gkv1156⟩
International audience; RegulonDB (http://regulondb.ccg.unam.mx) is one of the most useful and important resources on bacterial gene regulation, as it integrates the scattered scientific knowledge of the best-characterized organism, Escherichia coli
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::66532f66aa8e628dbb8419ab707e4984
https://doi.org/10.1093/nar/gkv1156
https://doi.org/10.1093/nar/gkv1156
Autor:
Alfredo José Hernández-Álvarez, Maricela Olvera, Gerardo Salgado-Osorio, Shirley Alquicira-Hernández, Kevin Alquicira-Hernández, Martín Peralta-Gil, Socorro Gama-Castro, Liliana Porrón-Sotelo, Verónica Jiménez-Jacinto, Jair S. García-Sotelo, Lucia Pannier, Verena Weiss, Julio Collado-Vides, Araceli M. Huerta, Alejandra Medina-Rivera, Heladia Salgado, Alejandra López-Fuentes, Leticia Vega-Alvarado, Alberto Santos-Zavaleta, Luis Muñiz-Rascado, César Bonavides-Martínez, Hilda Solano-Lira, Yalbi I. Balderas-Martínez, Aurora Labastida, Irma Martínez-Flores, Enrique Morett, Víctor Del Moral-Chávez
Publikováno v:
Nucleic Acids Research
This article summarizes our progress with RegulonDB (http://regulondb.ccg.unam.mx/) during the past 2 years. We have kept up-to-date the knowledge from the published literature regarding transcriptional regulation in Escherichia coli K-12. We have ma
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8894714a8aa3b2aec2d1d4d02de2e849
https://doi.org/10.1093/nar/gks1201
https://doi.org/10.1093/nar/gks1201
Autor:
Enrique Morett, Irma Martínez-Flores, Liliana Porrón-Sotelo, Alfredo Mendoza-Vargas, Alberto Santos-Zavaleta, Verena Weiss, Blanca Taboada, Verónica Jiménez-Jacinto, Ruth Martínez-Adame, Araceli M. Huerta, Julio Collado-Vides, Hilda Solano-Lira, Leonardo Collado-Torres, Luis Muñiz-Rascado, Juan Miranda-Ríos, Heladia Salgado, Alejandra López-Fuentes, Maricela Olvera, Ricardo Grande, Kevin Alquicira-Hernández, Leticia Olvera, Leticia Vega-Alvarado, Jair S. García-Sotelo, Shirley Alquicira-Hernández, Martín Peralta-Gil, César Bonavides-Martínez, Alejandra Medina-Rivera, Socorro Gama-Castro
Publikováno v:
Nucleic Acids Research
RegulonDB (http://regulondb.ccg.unam.mx/) is the primary reference database of the best-known regulatory network of any free-living organism, that of Escherichia coli K-12. The major conceptual change since 3 years ago is an expanded biological conte
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b26b8bdc1a8454ce072db6df58b8185b
https://doi.org/10.1093/nar/gkq1110
https://doi.org/10.1093/nar/gkq1110