Zobrazeno 1 - 5
of 5
pro vyhledávání: '"Jacquelyn M. Roger"'
Autor:
A. Geoffrey Lyle, Jacquelyn M. Roger, Matthew A. Cattle, Katrina Learned, Robert Currie, Sofie R. Salama, Holly C. Beale, Lauren Sanders, John Vivian, Olena M. Vaske, Du Linh Lam, Ellen Kephart, Drew K A Thompson, Isabel Bjork, Jacob Pfeil, David Haussler, Liam T. McKay
Publikováno v:
GigaScience, vol 10, iss 3
GigaScience
GigaScience
Background The reproducibility of gene expression measured by RNA sequencing (RNA-Seq) is dependent on the sequencing depth. While unmapped or non-exonic reads do not contribute to gene expression quantification, duplicate reads contribute to the qua
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e0c41d1a09b6a7b588df765f9b7c0686
https://escholarship.org/uc/item/2fq331n9
https://escholarship.org/uc/item/2fq331n9
Autor:
Olena Morozova Vaske, John Vivian, Sofie R. Salama, Robert Currie, Lauren Sanders, Geoff Lyle, Matthew A. Cattle, David Haussler, Liam T. McKay, Isabel Bjork, Katrina Learned, Holly C. Beale, Ellen Kephart, Du Linh Lam, Jacob Pfeil, Jacquelyn M. Roger
Publikováno v:
Cancer Research. 80:5464-5464
Gene expression analysis of single samples shows increasing promise for clinical applications. However, obtaining high quality RNA from a human tumor sample can be challenging because medical, surgical, and pathological requirements often lead to spa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::844dba5d3c1fdcc71a99f8cff4888104
https://doi.org/10.1158/1538-7445.am2020-5464
https://doi.org/10.1158/1538-7445.am2020-5464
Autor:
Holly C. Beale, Jacquelyn M. Roger, Matthew A. Cattle, Liam T. McKay, Drew K. A. Thomson, Katrina Learned, A. Geoffrey Lyle, Ellen T. Kephart, Rob Currie, Du Linh Lam, Lauren Sanders, Jacob Pfeil, John Vivian, Isabel Bjork, Sofie R. Salama, David Haussler, Olena M. Vaske
BackgroundThe accuracy of gene expression as measured by RNA sequencing (RNA-Seq) is dependent on the amount of sequencing performed. However, some types of reads are not informative for determining this accuracy. Unmapped and non-exonic reads do not
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f597a2c6c45837e76d97375425292e85
https://doi.org/10.1101/716829
https://doi.org/10.1101/716829
Autor:
Russell Corbett-Detig, Josh Hough, Jacquelyn M. Roger, Bryan Thornlow, Todd M. Lowe, Henry Gong
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America
Proceedings of the National Academy of Sciences of the United States of America, vol 115, iss 36
Proceedings of the National Academy of Sciences of the United States of America, vol 115, iss 36
Significance While transcription-associated mutagenesis (TAM) has been demonstrated for protein-coding genes, its implications in shaping genome structure at transfer RNA (tRNA) loci in metazoans have not been fully appreciated. We show that cytosoli
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cc98b34678f11baf83762240288ab032
https://pubmed.ncbi.nlm.nih.gov/30127029
https://pubmed.ncbi.nlm.nih.gov/30127029
Autor:
Beale, Holly C1,2 (AUTHOR) hcbeale@ucsc.edu, Roger, Jacquelyn M3 (AUTHOR), Cattle, Matthew A3 (AUTHOR), McKay, Liam T3 (AUTHOR), Thompson, Drew K A3 (AUTHOR), Learned, Katrina4 (AUTHOR), Lyle, A Geoffrey4,5 (AUTHOR), Kephart, Ellen T4 (AUTHOR), Currie, Rob4 (AUTHOR), Lam, Du Linh4 (AUTHOR), Sanders, Lauren5 (AUTHOR), Pfeil, Jacob4 (AUTHOR), Vivian, John4 (AUTHOR), Bjork, Isabel4 (AUTHOR), Salama, Sofie R6,7 (AUTHOR), Haussler, David6,7 (AUTHOR), Vaske, Olena M4,5 (AUTHOR) olena@ucsc.edu
Publikováno v:
GigaScience. Mar2021, Vol. 10 Issue 3, p1-8. 8p.