Zobrazeno 1 - 10
of 77
pro vyhledávání: '"Jack Deslippe"'
Autor:
Muaaz G. Awan, Jack Deslippe, Aydin Buluc, Oguz Selvitopi, Steven Hofmeyr, Leonid Oliker, Katherine Yelick
Publikováno v:
BMC Bioinformatics, Vol 21, Iss 1, Pp 1-29 (2020)
Abstract Background Bioinformatic workflows frequently make use of automated genome assembly and protein clustering tools. At the core of most of these tools, a significant portion of execution time is spent in determining optimal local alignment bet
Externí odkaz:
https://doaj.org/article/ba6db4eab85947ebb0b072d8b847bbc4
Autor:
Thomas M. Evans, Marianne M. Francois, Jack Deslippe, Erik W. Draeger, Timothy C. Germann, Daniel F. Martin, William E. Hart, Andrew R. Siegel
Publikováno v:
The International Journal of High Performance Computing Applications, vol 36, iss 1
Author(s): Evans, TM; Siegel, A; Draeger, EW; Deslippe, J; Francois, MM; Germann, TC; Hart, WE; Martin, DF | Abstract: The US Department of Energy Office of Science and the National Nuclear Security Administration initiated the Exascale Computing Pro
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f8f2b027c13505f04262d216a6c153ef
https://doi.org/10.1177/10943420211028940
https://doi.org/10.1177/10943420211028940
Autor:
Weiwei Gao, Felipe H. da Jornada, Mauro Del Ben, Jack Deslippe, Steven G. Louie, James R. Chelikowsky
Publikováno v:
Physical Review Materials. 6
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::91f5c61b0f76e87b212404978078ff4a
https://doi.org/10.1103/physrevmaterials.6.036201
https://doi.org/10.1103/physrevmaterials.6.036201
Autor:
Rob Egan, Jack Deslippe, Nan Ding, Leonid Oliker, Steven Hofmeyr, Aydin Buluc, Katherine Yelick, Muaaz Gul Awan
Publikováno v:
SC
Metagenomic workflows involve studying uncultured microorganisms directly from the environment. These environmental samples when processed by modern sequencing machines yield large and complex datasets that exceed the capabilities of metagenomic soft
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::cb4f5d33355dbf8a6495a31c43114a91
https://doi.org/10.1145/3458817.3476212
https://doi.org/10.1145/3458817.3476212
Autor:
Amanda Sabatini Dufek, Jack Deslippe, Pedro Leite da Silva Dias, Helio J. C. Barbosa, Douglas A. Augusto
Publikováno v:
GECCO Companion
Parallel and distributed computing systems have been seeing rapid growth in the number of processing cores as progress on single-core performance has stagnated. The larger the system, the greater the challenge for application scalability and system s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1d4c4f537faaf6ca94961a04a511e4e1
https://doi.org/10.1145/3449726.3463144
https://doi.org/10.1145/3449726.3463144
Autor:
Michael Rowan, Remi Lehe, Maxence Thévenet, Axel Huebl, Jean-Luc Vay, Jack Deslippe, Kevin Gott
Publikováno v:
PASC
Maintaining computational load balance is important to the performant behavior of codes which operate under a distributed computing model. This is especially true for GPU architectures, which can suffer from memory oversubscription if improperly load
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::460a9f29505d806c77e8b4a4b33efcb7
https://doi.org/10.1145/3468267.3470614
https://doi.org/10.1145/3468267.3470614
Autor:
Nathan Wichmann, Andrew Canning, Karthik Raman, Steven G. Louie, Ruchira Sasanka, Jack Deslippe, Mauro Del Ben, Felipe H. da Jornada, Chao Yang
Publikováno v:
Computer Physics Communications. 235:187-195
The ab initio GW approach is a rigorous Green’s-function-based framework that can be employed to compute electronic excitation properties of a wide variety of materials such as extended systems, molecules, as well as confined and nanostructured mat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ee3fba080effba8e8b871056bde3985a
https://doi.org/10.1016/j.cpc.2018.09.003
https://doi.org/10.1016/j.cpc.2018.09.003
Publikováno v:
Accelerator Programming Using Directives ISBN: 9783030742232
WACCPD@SC
WACCPD@SC
In this paper, we show that OpenMP 4.5 based implementation of TestSNAP, a proxy-app for the Spectral Neighbor Analysis Potential (SNAP) in LAMMPS, can be ported across the NVIDIA, Intel, and AMD GPUs. Roofline analysis is employed to assess the perf
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::66b4cdd93deda9820f66001f6590fa25
https://doi.org/10.1007/978-3-030-74224-9_1
https://doi.org/10.1007/978-3-030-74224-9_1
Autor:
Jack Deslippe, Steven G. Louie, Zhenglu Li, Charlene Yang, Mauro Del Ben, Felipe H. da Jornada
Publikováno v:
SC
Large-scale GW calculations are the state-of-the-art approach to accurately describe many-body excited-state phenomena in complex materials. This is critical for novel device design but due to their extremely high computational cost, these calculatio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a6b4e9773e31b94fdcb6d0e19f6a7f78
https://doi.org/10.1109/sc41405.2020.00008
https://doi.org/10.1109/sc41405.2020.00008