Zobrazeno 1 - 10
of 33
pro vyhledávání: '"Jabato, Fernando M."'
Autor:
Rojano, Elena1,2 (AUTHOR), Jabato, Fernando M.1,2 (AUTHOR), Perkins, James R.1,2,3 (AUTHOR) jimrperkins@gmail.com, Córdoba-Caballero, José1 (AUTHOR), García-Criado, Federico1 (AUTHOR), Sillitoe, Ian4 (AUTHOR), Orengo, Christine4 (AUTHOR), Ranea, Juan A. G.1,2,3 (AUTHOR), Seoane-Zonjic, Pedro1,2,3 (AUTHOR)
Publikováno v:
BMC Bioinformatics. 1/15/2022, Vol. 23 Issue 1, p1-19. 19p.
Autor:
Jabato, Fernando M.1,2, Córdoba-Caballero, José1, Rojano, Elena1,2, Romá-Mateo, Carlos2,3, Sanz, Pascual2,4, Pérez, Belén2,5,6, Gallego, Diana2,5,6, Seoane, Pedro1,2,7 seoanezonjic@uma.es, Ranea, Juan A. G.1,2,7, Perkins, James R.1,2,7
Publikováno v:
Scientific Reports. 7/23/2021, Vol. 11 Issue 1, p1-12. 12p.
Autor:
Díaz-Santiago, Elena1 (AUTHOR), Jabato, Fernando M.1 (AUTHOR), Rojano, Elena1 (AUTHOR), Seoane, Pedro1,2 (AUTHOR), Pazos, Florencio3 (AUTHOR), Perkins, James R.1,2,4 (AUTHOR) jimrperkins@uma.es, Ranea, Juan A. G.1,2,4 (AUTHOR)
Publikováno v:
PLoS Genetics. 10/1/2020, Vol. 16 Issue 10, p1-33. 33p.
Autor:
Rojano, Elena, Jabato, Fernando M., Perkins, James R., C��rdoba-Caballero, Jos��, Garc��a-Criado, Federico, Sillitoe, Ian, Orengo, Christine, Ranea, Juan A. G., Seoane-Zonjic, Pedro
Additional file 4. Table S4: Coverage values for all DomFun methods and all combinations of evaluation scenarios and ontologies, compared to the highest equivalent value from CAFA 3 and the baseline methods. Type 1: no knowledge, type 2: limited know
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2b0891c0d0fc5426d514b67826351be4
Autor:
Rojano, Elena, Jabato, Fernando M., Perkins, James R., C��rdoba-Caballero, Jos��, Garc��a-Criado, Federico, Sillitoe, Ian, Orengo, Christine, Ranea, Juan A. G., Seoane-Zonjic, Pedro
Additional file 5. Table S5: Smin values for all DomFun methods and all combinations of evaluation scenarios and ontologies, compared to the highest equivalent value from CAFA 3 and the baseline methods. Type 1: no knowledge, type 2: limited knowledg
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0bee9231d4de46603d0b152940d490f9
Autor:
Rojano, Elena, Jabato, Fernando M., Perkins, James R., C��rdoba-Caballero, Jos��, Garc��a-Criado, Federico, Sillitoe, Ian, Orengo, Christine, Ranea, Juan A. G., Seoane-Zonjic, Pedro
Additional file 7. Fig. S2: Precision and recall curves to ascertain DomFun accuracy using domain-function associations with superfamilies (PPP). superfamilyPPP.pdf Prediction results for Gene Ontology (GO) molecular functions (GOMF, red curves), bio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::eff4807cb8341bbeec0938ad8c2b14d1
Autor:
Rojano, Elena, Jabato, Fernando M., Perkins, James R., C��rdoba-Caballero, Jos��, Garc��a-Criado, Federico, Sillitoe, Ian, Orengo, Christine, Ranea, Juan A. G., Seoane-Zonjic, Pedro
Additional file 6. Fig. S1: Precision and recall curves to ascertain DomFun accuracy using domain-function associations with FunFams (PPP). funfamsPPP.pdf Prediction results for Gene Ontology (GO) molecular functions (GOMF, red curves), biological pr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::be8a020c8bbae191d155f06483ec1cac
Autor:
Rojano, Elena, Jabato, Fernando M., Perkins, James R., C��rdoba-Caballero, Jos��, Garc��a-Criado, Federico, Sillitoe, Ian, Orengo, Christine, Ranea, Juan A. G., Seoane-Zonjic, Pedro
Additional file 3. Table S3: DomFun Smin Top vs. CAFA Smin Top (top means lowest score). Type 1: no knowledge, type 2: limited knowledge. Mode 1: Full, mode 2: partial.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a18432b910129133195daf5cb969d989
Autor:
Rojano, Elena, Jabato, Fernando M., Perkins, James R., C��rdoba-Caballero, Jos��, Garc��a-Criado, Federico, Sillitoe, Ian, Orengo, Christine, Ranea, Juan A. G., Seoane-Zonjic, Pedro
Additional file 2. Table S2
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0d02d987848e6942e9cf44549cf36202
Autor:
Rojano, Elena, Jabato, Fernando M., Perkins, James R., C��rdoba-Caballero, Jos��, Garc��a-Criado, Federico, Sillitoe, Ian, Orengo, Christine, Ranea, Juan A. G., Seoane-Zonjic, Pedro
Additional file 1. Table S1: Fmax values for all DomFun methods and all combinations of evaluation scenarios and ontologies, compared to the highest equivalent value from CAFA 3 and the baseline methods. Type 1: no knowledge, type 2: limited knowledg
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1ec41f7da65457499fda16720ae8e00f