Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Ivan B. N. Clark"'
Publikováno v:
PLoS ONE, Vol 9, Iss 6, p e100042 (2014)
Recognition of the importance of cell-to-cell variability in cellular decision-making and a growing interest in stochastic modeling of cellular processes has led to an increased demand for high density, reproducible, single-cell measurements in time-
Externí odkaz:
https://doaj.org/article/7bd562685ffe4ac8bd298c94040de4c5
Autor:
Julian M. J. Pietsch, Andrew J. Millar, Ivan B. N. Clark, Eilidh Troup, Tomasz Zielinski, Johnny Hay
Publikováno v:
Wellcome Open Research
Hay, J, Troup, E, Clark, I, Pietsch, J, Zielinski, T & Millar, A J 2020, ' PyOmeroUpload : A Python toolkit for uploading images and metadata to OMERO ', Wellcome Open Research . https://doi.org/10.12688/wellcomeopenres.15853.1
Hay, J, Troup, E, Clark, I, Pietsch, J, Zielinski, T & Millar, A J 2020, ' PyOmeroUpload : A Python toolkit for uploading images and metadata to OMERO ', Wellcome Open Research . https://doi.org/10.12688/wellcomeopenres.15853.1
Tools and software that automate repetitive tasks, such as metadata extraction and deposition to data repositories, are essential for researchers to share Open Data, routinely. For research that generates microscopy image data, OMERO is an ideal plat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ea35f3b17afa33136e90c5678a7b4b5b
http://europepmc.org/articles/PMC7388197
http://europepmc.org/articles/PMC7388197
Autor:
Hiroko Sano, Prabhat S Kunwar, Andrew D Renault, Vitor Barbosa, Ivan B N Clark, Shuji Ishihara, Kaoru Sugimura, Ruth Lehmann
Publikováno v:
PLoS ONE, Vol 7, Iss 12, p e52649 (2012)
Organs develop distinctive morphologies to fulfill their unique functions. We used Drosophila embryonic gonads as a model to study how two different cell lineages, primordial germ cells (PGCs) and somatic gonadal precursors (SGPs), combine to form on
Externí odkaz:
https://doaj.org/article/74c994b8acfe42008b224135d964e7f7
Autor:
Keiran Stevenson, Ivan B. N. Clark, Peter S. Swain, Jackie Vogel, Teuta Pilizota, Luis F Montano-Gutierrez, Allen Leary
Publikováno v:
Nature Communications, Vol 7, Iss 1, Pp 1-8 (2016)
Swain, P, Stevenson, K, Leary, A, Montano-Gutierrez, L F, Clark, I B N, Vogel, J & Pilizota, T 2016, ' Inferring time-derivatives including cell growth rates using Gaussian processes ', Nature Communications, vol. 7, 13766 . https://doi.org/10.1038/ncomms13766
Swain, P, Stevenson, K, Leary, A, Montano-Gutierrez, L F, Clark, I B N, Vogel, J & Pilizota, T 2016, ' Inferring time-derivatives including cell growth rates using Gaussian processes ', Nature Communications, vol. 7, 13766 . https://doi.org/10.1038/ncomms13766
Often the time-derivative of a measured variable is of as much interest as the variable itself. For a growing population of biological cells, for example, the population's growth rate is typically more important than its size. Here we introduce a non
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d3a33ffc7d1192a7c14f8047303c70f6
https://doaj.org/article/6aefe21cd35443ab9d0e44b3d219f660
https://doaj.org/article/6aefe21cd35443ab9d0e44b3d219f660
Publikováno v:
Stevenson, K, McVey, A, Clark, I B N, Swain, P & Pilizota, T 2016, ' General calibration of microbial growth in microplate readers ', Scientific Reports, vol. 6, 38828 . https://doi.org/10.1038/srep38828
Scientific Reports
Scientific Reports
Optical density (OD) measurements of microbial growth are one of the most common techniques used in microbiology, with applications ranging from antibiotic efficacy studies, studies of growth under different nutritional or stress environments, to stu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4c1b566f273b3bb31c79763ea62e656f
https://www.pure.ed.ac.uk/ws/files/38217134/srep38828.pdf
https://www.pure.ed.ac.uk/ws/files/38217134/srep38828.pdf
Autor:
Peter S, Swain, Keiran, Stevenson, Allen, Leary, Luis F, Montano-Gutierrez, Ivan B N, Clark, Jackie, Vogel, Teuta, Pilizota
Publikováno v:
Nature Communications
Often the time derivative of a measured variable is of as much interest as the variable itself. For a growing population of biological cells, for example, the population's growth rate is typically more important than its size. Here we introduce a non
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::84148d6f5526915563604399a27a9970
https://pubmed.ncbi.nlm.nih.gov/27941811
https://pubmed.ncbi.nlm.nih.gov/27941811
Publikováno v:
Development. 138:2705-2715
Fibroblast growth factor (FGF)-dependent epithelial-mesenchymal transitions and cell migration contribute to the establishment of germ layers in vertebrates and other animals, but a comprehensive demonstration of the cellular activities that FGF cont
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::53f5b59f1a13289d5d8d158ef33a4acb
https://doi.org/10.1242/dev.060277
https://doi.org/10.1242/dev.060277
Publikováno v:
Klingseisen, A, Clark, I B N, Gryzik, T & Müller, H-A J 2009, ' Differential and overlapping functions of two closely related Drosophila FGF8-like growth factors in mesoderm development ', Development, vol. 136, no. 14, pp. 2393-402 . https://doi.org/10.1242/dev.035451
Thisbe (Ths) and Pyramus (Pyr), two closely related Drosophila homologues of the vertebrate fibroblast growth factor (FGF) 8/17/18 subfamily, are ligands for the FGF receptor Heartless (Htl). Both ligands are required for mesoderm development, but th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::83d968de0d88d7edcd49fd05b9cf6214
https://doi.org/10.1242/dev.035451
https://doi.org/10.1242/dev.035451
Publikováno v:
PLoS ONE, Vol 9, Iss 6, p e100042 (2014)
PLoS ONE
Crane, M M, Clark, I B N, Bakker, E, Smith, S & Swain, P S 2014, ' A microfluidic system for studying ageing and dynamic single-cell responses in budding yeast ', PLoS ONE, vol. 9, no. 6, e100042 . https://doi.org/10.1371/journal.pone.0100042
PLoS ONE
Crane, M M, Clark, I B N, Bakker, E, Smith, S & Swain, P S 2014, ' A microfluidic system for studying ageing and dynamic single-cell responses in budding yeast ', PLoS ONE, vol. 9, no. 6, e100042 . https://doi.org/10.1371/journal.pone.0100042
Recognition of the importance of cell-to-cell variability in cellular decision-making and a growing interest in stochastic modeling of cellular processes has led to an increased demand for high density, reproducible, single-cell measurements in time-
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f451e5ae0fd2fb58f24c6ef280e52475
http://europepmc.org/articles/PMC4065030?pdf=render
http://europepmc.org/articles/PMC4065030?pdf=render
Autor:
Vitor Barbosa, David J. Finnegan, Prabhat S. Kunwar, Ruth Lehmann, Andrew D. Renault, Hiroko Sano, Ivan B. N. Clark
Publikováno v:
Developmental Biology. 344(1)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ad2cff902ba4cf3e2ed11de52b109651