Zobrazeno 1 - 10
of 110
pro vyhledávání: '"Itzhak, Mizrahi"'
Autor:
Rasmus O. Jensen, Frederik Schulz, Simon Roux, Dawn M. Klingeman, Wayne P. Mitchell, Daniel Udwary, Sarah Moraïs, Vinicio Reynoso, James Winkler, Shilpa Nagaraju, Sashini De Tissera, Nicole Shapiro, Natalia Ivanova, T. B. K. Reddy, Itzhak Mizrahi, Sagar M. Utturkar, Edward A. Bayer, Tanja Woyke, Nigel J. Mouncey, Michael C. Jewett, Séan D. Simpson, Michael Köpke, David T. Jones, Steven D. Brown
Publikováno v:
Scientific Data, Vol 11, Iss 1, Pp 1-20 (2024)
Abstract The genus Clostridium is a large and diverse group within the Bacillota (formerly Firmicutes), whose members can encode useful complex traits such as solvent production, gas-fermentation, and lignocellulose breakdown. We describe 270 genome
Externí odkaz:
https://doaj.org/article/1d13a347d3f84967a3c06b01d08f7dbe
Autor:
Alvah Zorea, David Pellow, Liron Levin, Shai Pilosof, Jonathan Friedman, Ron Shamir, Itzhak Mizrahi
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-13 (2024)
Abstract Plasmids are pivotal in driving bacterial evolution through horizontal gene transfer. Here, we investigated 3467 human gut microbiome samples across continents and disease states, analyzing 11,086 plasmids. Our analyses reveal that plasmid d
Externí odkaz:
https://doaj.org/article/75b6061fa57949069b8ae7dab1d09edc
Autor:
Jonathan Dorival, Sarah Moraïs, Aurore Labourel, Bartosz Rozycki, Pierre-Andre Cazade, Jérôme Dabin, Eva Setter-Lamed, Itzhak Mizrahi, Damien Thompson, Aurélien Thureau, Edward A. Bayer, Mirjam Czjzek
Publikováno v:
Biotechnology for Biofuels and Bioproducts, Vol 15, Iss 1, Pp 1-17 (2022)
Abstract Background Natural cellulosome multi-enzyme complexes, their components, and engineered ‘designer cellulosomes’ (DCs) promise an efficient means of breaking down cellulosic substrates into valuable biofuel products. Their broad uptake in
Externí odkaz:
https://doaj.org/article/1749985cca63414cbd4cd3229e8ff044
Publikováno v:
Frontiers in Physiology, Vol 13 (2022)
Oxygen sensing mechanisms are essential for metazoans, their origin and evolution in the context of oxygen in Earth history are of interest. To trace the evolution of a main oxygen sensing mechanism among metazoans, the hypoxia induced factor, HIF, w
Externí odkaz:
https://doaj.org/article/e3dbc112bdef48b98cb0ecf528734b05
Autor:
David Pellow, Alvah Zorea, Maraike Probst, Ori Furman, Arik Segal, Itzhak Mizrahi, Ron Shamir
Publikováno v:
Microbiome, Vol 9, Iss 1, Pp 1-12 (2021)
Abstract Background Metagenomic sequencing has led to the identification and assembly of many new bacterial genome sequences. These bacteria often contain plasmids: usually small, circular double-stranded DNA molecules that may transfer across bacter
Externí odkaz:
https://doaj.org/article/76da7c6b660f4fb5b453a9b16c561a69
Autor:
Meltem Tatli, Sarah Moraïs, Omar E Tovar-Herrera, Yannick J Bomble, Edward A Bayer, Ohad Medalia, Itzhak Mizrahi
Publikováno v:
eLife, Vol 11 (2022)
The lives of microbes unfold at the micron scale, and their molecular machineries operate at the nanoscale. Their study at these resolutions is key toward achieving a better understanding of their ecology. We focus on cellulose degradation of the can
Externí odkaz:
https://doaj.org/article/85056f8cd01846e394f6c1492b988aa5
Publikováno v:
Microbial Biotechnology, Vol 13, Iss 6, Pp 1748-1764 (2020)
Summary The multi‐enzyme cellulosome complex can mediate the valorization of lignocellulosic biomass into soluble sugars that can serve in the production of biofuels and valuable products. A potent bacterial chassis for the production of active cel
Externí odkaz:
https://doaj.org/article/3f72360c3df6450596133e0d506bd5ff
Autor:
Ori Furman, Liat Shenhav, Goor Sasson, Fotini Kokou, Hen Honig, Shamay Jacoby, Tomer Hertz, Otto X. Cordero, Eran Halperin, Itzhak Mizrahi
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-13 (2020)
How complex microbial communities assemble through the animal’s life, and how predictable the assembly process is, remains poorly understood. Here, the authors profile the cow gut microbiome from birth to adulthood in animals born in C-section or n
Externí odkaz:
https://doaj.org/article/26b59bde22c4459ea09317aa5f41648a
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-10 (2020)
Historical contingency can affect community composition and function, but the extent to which this occurs is unclear. Here the authors use pitcher plant microbial communities to demonstrate that community dynamics and key metabolic functions at equil
Externí odkaz:
https://doaj.org/article/2f4ccbad7dcb413fba7f7802a8de7c57
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-13 (2019)
It is expected that plasmids are costly and therefore that selection is required to maintain them within bacterial populations. Here, Wein et al. show that plasmid stability can emerge even in the absence of positive selection and that loss may be de
Externí odkaz:
https://doaj.org/article/2a429e74a5e1447aa26da7321d695f52