Reconstructing promoter activity from Lux bioluminescent reporters.

Autor: Mudassar Iqbal, Neil Doherty, Anna M L Page, Saara N A Qazi, Ishan Ajmera, Peter A Lund, Theodore Kypraios, David J Scott, Philip J Hill, Dov J Stekel

Publikováno v: PLoS Computational Biology, Vol 13, Iss 9, p e1005731 (2017)

The bacterial Lux system is used as a gene expression reporter. It is fast, sensitive and non-destructive, enabling high frequency measurements. Originally developed for bacterial cells, it has also been adapted for eukaryotic cells, and can be used

Externí odkaz: https://doaj.org/article/ae72378de9864f7b817a50867612fec6

Integrated root phenotypes for improved rice performance under low nitrogen availability

Autor: Ishan Ajmera, Amelia Henry, Ando M. Radanielson, Stephanie P. Klein, Aleksandr Ianevski, Malcolm J. Bennett, Leah R. Band, Jonathan P. Lynch

Publikováno v: Plant, Cell & Environment. 45:805-822

Greater nitrogen efficiency would substantially reduce the economic, energy and environmental costs of rice production. We hypothesized that synergistic balancing of the costs and benefits for soil exploration among root architectural phenes is benef

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0833c9f4aae6696b797129ae9fdc3d2f
https://doi.org/10.1111/pce.14284

In silicoevidence for the utility of parsimonious root phenotypes for improved vegetative growth and carbon sequestration under drought

Autor: Ernst D. Schäfer, Ishan Ajmera, Etienne Farcot, Markus R. Owen, Leah R. Band, Jonathan P. Lynch

Drought is a primary constraint to crop yields and climate change is expected to increase the frequency and severity of drought stress in the future. It has been hypothesized that crops can be made more resistant to drought and better able to sequest

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::ad5a479684557f5e6eb8372183026fb9
https://doi.org/10.1101/2022.08.04.502508

RootSlice – a novel functional-structural model for root anatomical phenotypes

Autor: Jonathan Lynch, Sankalp Arya, Jagdeep Sidhu, Ishan Ajmera

Root anatomy is an important determinant of root metabolic costs, soil exploration, and soil resource capture. Root anatomy varies substantially within and among plant species. RootSlice is a multicellular functional-structural model of root anatomy

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::a7406ffd98195832a9d7834dfee8c650
https://doi.org/10.1101/2022.06.29.498145

Multiseriate cortical sclerenchyma enhance root penetration in compacted soils

Autor: Sacha J. Mooney, Ishan Ajmera, Hannah M. Schneider, Alden C. Perkins, Meredith T. Hanlon, Christopher F. Strock, Jonathan P. Lynch, Kathleen M. Brown, Jagdeep Singh Sidhu, Dorien J. Vanhees

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America
Proceedings of the National Academy of Sciences of the United States of America, 118(6)
Proceedings of the National Academy of Sciences of the United States of America 118 (2021) 6

Significance Multiseriate cortical sclerenchyma (MCS) is a root anatomical phenotype with utility in environments with mechanical impedance. The MCS phenotype is characterized by small cells with thick walls in outer cortical tissue. Genotypes with M

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::71227a143dbfd876158f0df7da757a9a
https://doi.org/10.1073/pnas.2012087118