Zobrazeno 1 - 10
of 29
pro vyhledávání: '"Irina, Koester"'
Autor:
Wesley J. Sparagon, Milou G. I. Arts, Zachary A. Quinlan, Linda Wegley Kelly, Irina Koester, Jacqueline Comstock, Jessica A. Bullington, Craig A. Carlson, Pieter C. Dorrestein, Lihini I. Aluwihare, Andreas F. Haas, Craig E. Nelson
Publikováno v:
Communications Biology, Vol 7, Iss 1, Pp 1-14 (2024)
Abstract Coral bleaching is a well-documented and increasingly widespread phenomenon in reefs across the globe, yet there has been relatively little research on the implications for reef water column microbiology and biogeochemistry. A mesocosm heati
Externí odkaz:
https://doaj.org/article/98b434d7f38f4d60a5b879194be60311
Autor:
Robin Schmid, Daniel Petras, Louis-Félix Nothias, Mingxun Wang, Allegra T. Aron, Annika Jagels, Hiroshi Tsugawa, Johannes Rainer, Mar Garcia-Aloy, Kai Dührkop, Ansgar Korf, Tomáš Pluskal, Zdeněk Kameník, Alan K. Jarmusch, Andrés Mauricio Caraballo-Rodríguez, Kelly C. Weldon, Melissa Nothias-Esposito, Alexander A. Aksenov, Anelize Bauermeister, Andrea Albarracin Orio, Carlismari O. Grundmann, Fernando Vargas, Irina Koester, Julia M. Gauglitz, Emily C. Gentry, Yannick Hövelmann, Svetlana A. Kalinina, Matthew A. Pendergraft, Morgan Panitchpakdi, Richard Tehan, Audrey Le Gouellec, Gajender Aleti, Helena Mannochio Russo, Birgit Arndt, Florian Hübner, Heiko Hayen, Hui Zhi, Manuela Raffatellu, Kimberly A. Prather, Lihini I. Aluwihare, Sebastian Böcker, Kerry L. McPhail, Hans-Ulrich Humpf, Uwe Karst, Pieter C. Dorrestein
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-12 (2021)
Abstract Molecular networking connects mass spectra of molecules based on the similarity of their fragmentation patterns. However, during ionization, molecules commonly form multiple ion species with different fragmentation behavior. As a result, the
Externí odkaz:
https://doaj.org/article/c79c811ddd0b40428c0ef8e4c5a7fe4c
Autor:
Zachary A. Quinlan, Irina Koester, Allegra T. Aron, Daniel Petras, Lihini I. Aluwihare, Pieter C. Dorrestein, Craig E. Nelson, Linda Wegley Kelly
Publikováno v:
Metabolites, Vol 12, Iss 12, p 1275 (2022)
Recent developments in molecular networking have expanded our ability to characterize the metabolome of diverse samples that contain a significant proportion of ion features with no mass spectral match to known compounds. Manual and tool-assisted nat
Externí odkaz:
https://doaj.org/article/a395f4fe7d4d48c59302a46365a935dc
Autor:
Linda Wegley Kelly, Craig E. Nelson, Lihini I. Aluwihare, Milou G. I. Arts, Pieter C. Dorrestein, Irina Koester, Shayle B. Matsuda, Daniel Petras, Zachary A. Quinlan, Andreas F. Haas
Publikováno v:
Frontiers in Marine Science, Vol 8 (2021)
The rapidly advancing field of metabolomics encompasses a diverse suite of powerful analytical and bioinformatic tools that can help to reveal the diversity and activity of chemical compounds in individual organisms, species interactions, and entire
Externí odkaz:
https://doaj.org/article/111bdc15334344b7b76a53dc55067e13
Autor:
Margot E. White, Tran B. Nguyen, Irina Koester, Mary C. Lardie Gaylord, J. Michael Beman, Kenneth L. Smith, Ann P. McNichol, Steven R. Beaupré, Lihini I. Aluwihare
Publikováno v:
Global Biogeochemical Cycles. 37
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::23ff822cf411a3df870d9692107abf03
https://doi.org/10.1029/2022gb007603
https://doi.org/10.1029/2022gb007603
Autor:
Sonia Marie Vargas, J.S. Karolewski, A E Cairo, J M Beman, Elisabet Perez-Coronel, Scott D. Wankel, Lihini I. Aluwihare, S Vazquez, Irina Koester, Jesse M. Wilson, A Yu, Margot E. White
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-11 (2021)
Nature Communications
Nature Communications
Oceanic oxygen minimum zones (OMZs) are globally significant sites of biogeochemical cycling where microorganisms deplete dissolved oxygen (DO) to concentrations
Oxygen is fundamental for marine life, yet it is absent from large areas of the oce
Oxygen is fundamental for marine life, yet it is absent from large areas of the oce
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bb6bd8dbcb2bce66890ab4cf26fc2203
https://doaj.org/article/9a5b221507c04967997ff4d9670f3c63
https://doaj.org/article/9a5b221507c04967997ff4d9670f3c63
Autor:
Daniel Petras, Irina Koester, Ricardo Da Silva, Brandon M. Stephens, Andreas F. Haas, Craig E. Nelson, Linda W. Kelly, Lihini I. Aluwihare, Pieter C. Dorrestein
Publikováno v:
Frontiers in Marine Science, Vol 4 (2017)
Dissolved organic matter (DOM) is arguably one of the most complex exometabolomes on earth, and is comprised of thousands of compounds, that together contribute more than 600 × 1015 g carbon. This reservoir is primarily the product of interactions b
Externí odkaz:
https://doaj.org/article/1d6d8688791b4366b1c0963ad3a6fb89
Autor:
Irina Koester, Zachary A. Quinlan, Louis‐Félix Nothias, Margot E. White, Ariel Rabines, Daniel Petras, John K. Brunson, Kai Dührkop, Marcus Ludwig, Sebastian Böcker, Farooq Azam, Andrew E. Allen, Pieter C. Dorrestein, Lihini I. Aluwihare
Publikováno v:
Environmental microbiology. 24(11)
The exchange of metabolites mediates algal and bacterial interactions that maintain ecosystem function. Yet, while thousands of metabolites are produced, only a few molecules have been identified in these associations. Using the ubiquitous microalgae
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1e1cc0b1904b15e63bf66e4c4b0db778
https://pubmed.ncbi.nlm.nih.gov/36222155
https://pubmed.ncbi.nlm.nih.gov/36222155
Autor:
Markus Fleischauer, Daniel Petras, Irina Koester, Martin Hoffmann, Kai Dührkop, Louis-Félix Nothias, Marcus Ludwig, Pieter C. Dorrestein, Lihini I. Aluwihare, Fernando Vargas, Mustafa Morsy, Sebastian Böcker
Publikováno v:
Nature Machine Intelligence. 2:629-641
The confident high-throughput identification of small molecules is one of the most challenging tasks in mass spectrometry-based metabolomics. Annotating the molecular formula of a compound is the first step towards its structural elucidation. Yet eve
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::982a74b64450bec4a629b2701d46b024
https://doi.org/10.1038/s42256-020-00234-6
https://doi.org/10.1038/s42256-020-00234-6
Autor:
Daniel Petras, Aldo Moreno Ulloa, Cristopher A. Boya P., Fernando Vargas, Randy Mojica-Flores, Alan K. Jarmusch, Kunyang Sun, Marcelino Gutiérrez, Kyo Bin Kang, Richard M. Tehan, Mingxun Wang, Robert A. Keyzers, Alexander A. Aksenov, Justin J. J. van der Hooft, Christine M. Aceves, Fidele Tugizimana, Andrew W. Truman, Martin H. Christian, Angela I. Calderón, Javier Andres Tejeda Mora, Johant Lakey-Beitia, Nicole Tayler, Nicole Sikora, Andrés Mauricio Caraballo-Rodríguez, Kelly C. Weldon, Julia M. Gauglitz, Emily C. Gentry, Pieter C. Dorrestein, Yilue Zhang, Nuno Bandeira, Louis-Félix Nothias, Mélissa Nothias-Esposito, Nombuso Ndlovu, Irina Koester, Samuel Bertrand, Allegra T. Aron, Victor Vásquez-Chaves, Robin Schmid, Kerry L. McPhail, Madeleine Ernst, Catherine Roullier, Amina Bouslimani
Publikováno v:
Nature protocols, 15, 1954-1991
Nature protocols 15 (2020)
Nature Protocols
Nature Protocols, Nature Publishing Group, 2020, 15 (6), pp.1954-1991. ⟨10.1038/s41596-020-0317-5⟩
Nature Protocols volume 15, pages1954–1991(2020)
Kérwá
Universidad de Costa Rica
instacron:UCR
Nature protocols 15 (2020)
Nature Protocols
Nature Protocols, Nature Publishing Group, 2020, 15 (6), pp.1954-1991. ⟨10.1038/s41596-020-0317-5⟩
Nature Protocols volume 15, pages1954–1991(2020)
Kérwá
Universidad de Costa Rica
instacron:UCR
Global Natural Product Social Molecular Networking (GNPS) is an interactive online small molecule–focused tandem mass spectrometry (MS2) data curation and analysis infrastructure. It is intended to provide as much chemical insight as possible into
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5146b3910a36ac060ac30de7833fdc12
https://doi.org/10.1038/s41596-020-0317-5
https://doi.org/10.1038/s41596-020-0317-5