Zobrazeno 1 - 10
of 28
pro vyhledávání: '"Irena I. Artamonova"'
Autor:
Natalia V. Zakharevich, Mikhail S. Nikitin, Alexey S. Kovtun, Vsevolod O. Malov, Olga V. Averina, Valery N. Danilenko, Irena I. Artamonova
Publikováno v:
Life, Vol 12, Iss 3, p 367 (2022)
The human gut microbiome is associated with various diseases, including autism spectrum disorders (ASD). Variations of the taxonomical composition in the gut microbiome of children with ASD have been observed repeatedly. However, features and paramet
Externí odkaz:
https://doaj.org/article/0fe496fc72e04f65bf73239220a1ea41
Autor:
Olga O. Bochkareva, Natalia O. Dranenko, Elena S. Ocheredko, German M. Kanevsky, Yaroslav N. Lozinsky, Vera A. Khalaycheva, Irena I. Artamonova, Mikhail S. Gelfand
Publikováno v:
PeerJ, Vol 6, p e4545 (2018)
Genome rearrangements have played an important role in the evolution of Yersinia pestis from its progenitor Yersinia pseudotuberculosis. Traditional phylogenetic trees for Y. pestis based on sequence comparison have short internal branches and low bo
Externí odkaz:
https://doaj.org/article/d67df6d9d24c4b8ca3fc66a3feb36011
Autor:
Sofia Medvedeva, Mikhail Kapustin, Konstantin Severinov, Maria D. Logacheva, Irena I. Artamonova, Sergey Shmakov, Anna Lopatina, Ekaterina Savitskaya, Alexey N. Tikhonov
Publikováno v:
Molecular Ecology. 26:2019-2026
CRISPR-Cas are nucleic acid-based prokaryotic immune systems. CRISPR arrays accumulate spacers from foreign DNA and provide resistance to mobile genetic elements containing identical or similar sequences. Thus, the set of spacers present in a given b
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::733e1beb3e5a67a1f207333250e00119
https://doi.org/10.1111/mec.13961
https://doi.org/10.1111/mec.13961
Publikováno v:
Environmental Microbiology. 17:2203-2208
Summary Assessment of phylogenetic positions of predicted gene and protein sequences is a routine step in any genome project, useful for validating the species' taxonomic position and for evaluating hypotheses about genome evolution and function. Sev
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::32cabb4336d762f3758fd3eb8ca53bda
https://doi.org/10.1111/1462-2920.12854
https://doi.org/10.1111/1462-2920.12854
Autor:
Olga O, Bochkareva, Natalia O, Dranenko, Elena S, Ocheredko, German M, Kanevsky, Yaroslav N, Lozinsky, Vera A, Khalaycheva, Irena I, Artamonova, Mikhail S, Gelfand
Publikováno v:
PeerJ
Genome rearrangements have played an important role in the evolution of Yersinia pestis from its progenitor Yersinia pseudotuberculosis. Traditional phylogenetic trees for Y. pestis based on sequence comparison have short internal branches and low bo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::b23447bfd11fa8cc23da2d23fe4e1bfc
https://pubmed.ncbi.nlm.nih.gov/29607260
https://pubmed.ncbi.nlm.nih.gov/29607260
Autor:
Valery N. Danilenko, Vladimir A. Palyulin, Irena I. Artamonova, Natalia V. Zakharevich, Nikolay S. Zefirov, Dmitry I. Osolodkin
Publikováno v:
Proteins: Structure, Function, and Bioinformatics. 80:1363-1376
Eukaryotic-like serine/threonine protein kinases (ESTPKs) are widely spread throughout the bacterial genomes. These enzymes can be potential targets of new antibacterial drugs useful for the treatment of socially important diseases such as tuberculos
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eb16e47112c1e6e4e1511b6bb6f23998
https://doi.org/10.1002/prot.24032
https://doi.org/10.1002/prot.24032
Publikováno v:
Applied and Environmental Microbiology. 76:2136-2144
Clustered regularly interspaced short palindromic repeats (CRISPRs) form a recently characterized type of prokaryotic antiphage defense system. The phage-host interactions involving CRISPRs have been studied in experiments with selected bacterial or
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::96ca2eba9fe6928961bb618a2565b6f0
https://doi.org/10.1128/aem.01985-09
https://doi.org/10.1128/aem.01985-09
Publikováno v:
Environmental microbiology. 17(7)
Assessment of phylogenetic positions of predicted gene and protein sequences is a routine step in any genome project, useful for validating the species' taxonomic position and for evaluating hypotheses about genome evolution and function. Several rec
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::0ed38c55608bc5d45e914cb4279db581
https://pubmed.ncbi.nlm.nih.gov/25919787
https://pubmed.ncbi.nlm.nih.gov/25919787
Publikováno v:
Bioinformatics 21, 3, 49-57 (2005)
Motivation: Millions of protein sequences currently being deposited to sequence databanks will never be annotated manually. Similarity-based annotation generated by automatic software pipelines unavoidably contains spurious assignments due to the imp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::15edaa2ae52f0b92ddf8d16ca96cb5bf
https://doi.org/10.1093/bioinformatics/bti1206
https://doi.org/10.1093/bioinformatics/bti1206
Publikováno v:
Journal of Molecular Evolution. 59:620-631
Cancer/testis antigens (CT-antigens) are proteins that are predominantly expressed in cancer and testis and thus are possible targets for immunotherapy. Most of them form large multigene families. The evolution of the MAGE-A family of CT-antigens is
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cb714109a70ff4b2a65bc1143156bc14
https://doi.org/10.1007/s00239-004-2654-3
https://doi.org/10.1007/s00239-004-2654-3