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pro vyhledávání: '"Innocenti, Nicolas"'
Autor:
Innocenti, Nicolas
Next Generation Sequencing (NGS) is a new technology that has revolutionized the way we study living organisms. Where previously only a few genes could be studied at a time through targeted direct probing, NGS offers the possibility to perform measur
Externí odkaz:
http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-173219
Circular RNAs (circRNAs) are a class of RNA with an important role in micro RNA (miRNA) regulation recently discovered in Human and various other eukaryotes as well as in archaea. Here, we have analyzed RNA-seq data obtained from {\it Enterococcus fa
Externí odkaz:
http://arxiv.org/abs/1606.04576
Autor:
Innocenti, Nicolas
The atom probe is an analysis technique based on the emission of ionized species from a needle-shaped sample (apex radius < 100 nm) under the influence of a very strong electric field ( 10-50 V/nm). A DC-voltage is applied on the sample in order to g
Externí odkaz:
http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-51018
Minimal absent words (MAW) of a genomic sequence are subsequences that are absent themselves but the subwords of which are all present in the sequence. The characteristic distribution of genomic MAWs as a function of their length has been observed to
Externí odkaz:
http://arxiv.org/abs/1509.05188
Autor:
Innocenti, Nicolas
The present master's thesis deals with numerical modeling of solid-state micrometrical-sized polymeric dye lasers, commonly denoted as microcavities. It is part of a large research initiative carried out in the optics group, at the MAP (Microelectron
Externí odkaz:
http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-46569
Autor:
Innocenti, Nicolas, Golumbeanu, Monica, d'Hérouël, Aymeric Fouquier, Lacoux, Caroline, Bonnin, Rémy A., Kennedy, Sean P., Wessner, Françoise, Serror, Pascale, Bouloc, Philippe, Repoila, Francis, Aurell, Erik
Enterococcus faecalis is the third cause of nosocomial infections. To obtain the first comprehensive view of transcriptional organizations in this bacterium, we used a modified RNA-seq approach enabling to discriminate primary from processed 5'RNA en
Externí odkaz:
http://arxiv.org/abs/1410.1925
Autor:
Chatterjee, Saikat, Koslicki, David, Dong, Siyuan, Innocenti, Nicolas, Cheng, Lu, Lan, Yueheng, Vehkaperä, Mikko, Skoglund, Mikael, Rasmussen, Lars K., Aurell, Erik, Corander, Jukka
Motivation: Estimation of bacterial community composition from a high-throughput sequenced sample is an important task in metagenomics applications. Since the sample sequence data typically harbors reads of variable lengths and different levels of bi
Externí odkaz:
http://arxiv.org/abs/1407.0387
Autor:
Innocenti, Nicolas, Aurell, Erik
Publikováno v:
J. Stat. Mech. (2013) P10013
High-throughput transcriptomics experiments have reached the stage where the count of the number of reads alignable to a given position can be treated as an almost-continuous signal. This allows to ask questions of biophysical/biotechnical nature, bu
Externí odkaz:
http://arxiv.org/abs/1303.4229
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