Zobrazeno 1 - 10
of 23
pro vyhledávání: '"Ilari Scheinin"'
Autor:
Siggberg Linda, Sirpa Ala-Mello, Tarja Linnankivi, Kristiina Avela, Ilari Scheinin, Kati Kristiansson, Päivi Lahermo, Marja Hietala, Liisa Metsähonkala, Esa Kuusinen, Maarit Laaksonen, Janna Saarela, Sakari Knuutila
Publikováno v:
BMC Medical Genetics, Vol 13, Iss 1, p 84 (2012)
Abstract Background Diagnostic analysis of patients with developmental disorders has improved over recent years largely due to the use of microarray technology. Array methods that facilitate copy number analysis have enabled the diagnosis of up to 20
Externí odkaz:
https://doaj.org/article/01861c2793b3415db501f8d99a92a8d6
Autor:
Hinke F. van Thuijl, Hendrik F. van Essen, Tim J. Veersema, Jaap C. Reijneveld, Annetteke Y.N. Schouten-van Meeteren, Bauke Ylstra, Daoud Sie, Pieter Wesseling, Peter C. van Rijen, Cyrille H. Ferrier, Wim G.M. Spliet, Avanita S. Prabowo, Anand Iyer, Maria Thom, Eleonora Aronica, Ilari Scheinin
Publikováno v:
Neuropathology and Applied Neurobiology. 41:743-755
AIM: Gangliogliomas (GGs) and dysembryoplastic neuroepithelial tumours (DNTs) represent the most common histological entities within the spectrum of glioneuronal tumours (GNTs). The wide variability of morphological features complicates histological
Autor:
Massimo Serra, Pekka Ellonen, Eeva Kettunen, Ilari Scheinin, Leo Lahti, Sakari Knuutila, Piero Picci, Virinder Kaur Sarhadi, Katia Scotlandi
Publikováno v:
Genes, Chromosomes and Cancer. 53:579-588
Genetic alterations affecting 9p are commonly present in many cancer types and many cancer-related genes are located in this chromosomal region. We sequenced all of the genes located in a 32Mb region of 9p by targeted next generation sequencing (NGS)
Publikováno v:
Leukemia & Lymphoma. 52:1567-1573
Recently, the microRNA (miRNA) signature has been used for better characterization and understanding of the pathogenesis of different malignancies, including myelodysplastic syndromes (MDS). MDS are a heterogeneous group of stem cell disorders in whi
Autor:
Outi Monni, Arto Kokkola, Sakari Knuutila, Marja-Liisa Karjalainen-Lindsberg, Reija Autio, Pauli Puolakkainen, Ilari Scheinin, Samuel Myllykangas, Tuula Kiviluoto, Jaakko Hollmén, Siina Junnila
Publikováno v:
International Journal of Cancer. 123:817-825
We performed an integrated array comparative genomic hybridization (aCGH) and expression microarray analysis of 8 normal gastric tissues and 38 primary tumors, including 25 intestinal and 13 diffuse gastric adenocarcinomas to identify genes whose exp
Autor:
Juha Saharinen, Ioana Borze, Sakari Knuutila, Ilari Scheinin, Tom Böhling, Samuel Myllykangas
Publikováno v:
Nucleic Acids Research
The use of genome-wide and high-throughput screening methods on large sample sizes is a well-grounded approach when studying a process as complex and heterogeneous as tumorigenesis. Gene copy number changes are one of the main mechanisms causing canc
Autor:
Avanita S, Prabowo, Hinke Foka, van Thuijl, Ilari, Scheinin, Daoud, Sie, Hendrik F, van Essen, Anand M, Iyer, Wim G M, Spliet, Cyrille H, Ferrier, Peter C, van Rijen, Tim J, Veersema, Maria, Thom, Annetteke Y N, Schouten-van Meeteren, Jaap C, Reijneveld, Bauke, Ylstra, Pieter, Wesseling, Eleonora, Aronica
Publikováno v:
Neuropathology and applied neurobiology. 41(6)
Gangliogliomas (GGs) and dysembryoplastic neuroepithelial tumours (DNTs) represent the most common histological entities within the spectrum of glioneuronal tumours (GNTs). The wide variability of morphological features complicates histological class
Autor:
Hinke F. van Thuijl, Jaap C. Reijneveld, Bauke Ylstra, Ilari Scheinin, Paul P. Eijk, Adam B. Olshen, Daniel Pinkel, François Rustenburg, Donna G. Albertson, Hendrik F. van Essen, Mark A. van de Wiel, Daoud Sie, Gerrit A. Meijer, Pieter Wesseling, Henrik Bengtsson
Publikováno v:
Genome research, 24(12), 2022-2032. Cold Spring Harbor Laboratory Press
Genome Research, 24, 12, pp. 2022-32
Scheinin, I, Sie, D L S, Bengtsson, H, van de Wiel, M A, Olshen, A B, van Thuijl, H F, van Essen, H F, Eijk, P P, Rustenburg, F, Meijer, G A, Reijneveld, J C, Wesseling, P, Pinkel, D, Albertson, DG & Ylstra, B 2014, ' DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly ', Genome Research, vol. 24, no. 12, pp. 2022-2032 . https://doi.org/10.1101/gr.175141.114
Genome Research, 24(12), 2022-2032. Cold Spring Harbor Laboratory Press
Genome research, vol 24, iss 12
Genome Research, 24, 2022-32
Scheinin, I; Sie, D; Bengtsson, H; Van De Wiel, MA; Olshen, AB; Van Thuijl, HF; et al.(2014). DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly. Genome Research, 24(12), 2022-2032. doi: 10.1101/gr.175141.114. UC San Francisco: Retrieved from: http://www.escholarship.org/uc/item/00k6c9z8
Genome Research, 24, 12, pp. 2022-32
Scheinin, I, Sie, D L S, Bengtsson, H, van de Wiel, M A, Olshen, A B, van Thuijl, H F, van Essen, H F, Eijk, P P, Rustenburg, F, Meijer, G A, Reijneveld, J C, Wesseling, P, Pinkel, D, Albertson, DG & Ylstra, B 2014, ' DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly ', Genome Research, vol. 24, no. 12, pp. 2022-2032 . https://doi.org/10.1101/gr.175141.114
Genome Research, 24(12), 2022-2032. Cold Spring Harbor Laboratory Press
Genome research, vol 24, iss 12
Genome Research, 24, 2022-32
Scheinin, I; Sie, D; Bengtsson, H; Van De Wiel, MA; Olshen, AB; Van Thuijl, HF; et al.(2014). DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly. Genome Research, 24(12), 2022-2032. doi: 10.1101/gr.175141.114. UC San Francisco: Retrieved from: http://www.escholarship.org/uc/item/00k6c9z8
Contains fulltext : 139379.pdf (Publisher’s version ) (Open Access) Detection of DNA copy number aberrations by shallow whole-genome sequencing (WGS) faces many challenges, including lack of completion and errors in the human reference genome, repe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ec4e62ca94d6fb7ed260e8d582ff830e
https://pure.amc.nl/en/publications/dna-copy-number-analysis-of-fresh-and-formalinfixed-specimens-by-shallow-wholegenome-sequencing-with-identification-and-exclusion-of-problematic-regions-in-the-genome-assembly(230aeed3-2ff4-47bc-a19e-81f4066b0d52).html
https://pure.amc.nl/en/publications/dna-copy-number-analysis-of-fresh-and-formalinfixed-specimens-by-shallow-wholegenome-sequencing-with-identification-and-exclusion-of-problematic-regions-in-the-genome-assembly(230aeed3-2ff4-47bc-a19e-81f4066b0d52).html
Autor:
Pieter Wesseling, Ahmed Idbaih, Ilari Scheinin, Blandine Boisselier, Jean-Yves Delattre, Laurent Capelle, Bauke Ylstra, Hussa Alshehhi, Khê Hoang-Xuan, Marc Sanson, Agusti Alentorn, Hinke F. van Thuijl, Karima Mokhtari, Jaap C. Reijneveld, Catherine Carpentier, Florence Laigle-Donadey, Yannick Marie
Publikováno v:
Neuro-Oncology, 16(3), 400-408. Oxford University Press
Neuro-Oncology, 16, 3, pp. 400-8
Alentorn, A, van Thuijl, H F, Marie, Y, Alshehhi, H, Carpentier, C, Boisselier, B, Laigle-Donadey, F, Mokhtari, K, Scheinin, I, Wesseling, P, Ylstra, B, Capelle, L, Hoang-Xuan, K, Sanson, M, Delattre, J Y, Reijneveld, J C & Idbaih, A 2014, ' Clinical value of chromosome arms 19q and 11p losses in low-grade gliomas ', Neuro-Oncology, vol. 16, no. 3, pp. 400-408 . https://doi.org/10.1093/neuonc/not227
Neuro-Oncology, 16, 400-8
Neuro-Oncology, 16, 3, pp. 400-8
Alentorn, A, van Thuijl, H F, Marie, Y, Alshehhi, H, Carpentier, C, Boisselier, B, Laigle-Donadey, F, Mokhtari, K, Scheinin, I, Wesseling, P, Ylstra, B, Capelle, L, Hoang-Xuan, K, Sanson, M, Delattre, J Y, Reijneveld, J C & Idbaih, A 2014, ' Clinical value of chromosome arms 19q and 11p losses in low-grade gliomas ', Neuro-Oncology, vol. 16, no. 3, pp. 400-408 . https://doi.org/10.1093/neuonc/not227
Neuro-Oncology, 16, 400-8
Item does not contain fulltext BACKGROUND: Diffuse low-grade gliomas (LGGs) form a heterogeneous subgroup of gliomas in adults. Chromosome (chr) arms 1p/19q codeletion and IDH mutation have been shown to be closely associated with oligodendroglial ph
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ab2b9ba62840e583a2b744602039b460
https://research.vumc.nl/en/publications/593dfd0d-1554-4a6d-ad94-8ff034bde3cd
https://research.vumc.nl/en/publications/593dfd0d-1554-4a6d-ad94-8ff034bde3cd
Autor:
Virinder Kaur, Sarhadi, Leo, Lahti, Ilari, Scheinin, Pekka, Ellonen, Eeva, Kettunen, Massimo, Serra, Katia, Scotlandi, Piero, Picci, Sakari, Knuutila
Publikováno v:
Genes, chromosomescancer. 53(7)
Genetic alterations affecting 9p are commonly present in many cancer types and many cancer-related genes are located in this chromosomal region. We sequenced all of the genes located in a 32Mb region of 9p by targeted next generation sequencing (NGS)