Zobrazeno 1 - 10
of 23
pro vyhledávání: '"Ian K. Quigley"'
Autor:
Ian K Quigley, Chris Kintner
Publikováno v:
PLoS Genetics, Vol 13, Iss 1, p e1006538 (2017)
Cooperative transcription factor binding at cis-regulatory sites in the genome drives robust eukaryotic gene expression, and many such sites must be coordinated to produce coherent transcriptional programs. The transcriptional program leading to moti
Externí odkaz:
https://doaj.org/article/d7861d977a5b495c9f9e1027b1a4a799
Autor:
Peter Walentek, Ian K Quigley, Dingyuan I Sun, Umeet K Sajjan, Christopher Kintner, Richard M Harland
Publikováno v:
eLife, Vol 5 (2016)
Upon cell cycle exit, centriole-to-basal body transition facilitates cilia formation. The centriolar protein Cp110 is a regulator of this process and cilia inhibitor, but its positive roles in ciliogenesis remain poorly understood. Using Xenopus we s
Externí odkaz:
https://doaj.org/article/4e27a14dced0441298cbcaeed6db559d
Autor:
Yolanda T. Chong, Vlad Rodic, Fiona L. Weathersby, Carl A. Brooks, Michael F. Cuccarese, Nathan H. Lazar, Ian K. Quigley, Christopher C. Gibson, Ronald W. Alfa, Berton A. Earnshaw, Kirk R. Thomas, Michael A. Statnick, Brandon L. Probst, Ben Fogelson, Nicholas D. Campbell, Jes Ford, Kathleen-Rose Skelly, Mason L. Victors, Seth W. Glazier, Peter F. McLean, James D. Jensen, Imran S. Haque, Anne E. Carpenter, Sharath S. Hegde, Chadwick T. Davis, Katie Heiser, Pamela Jacobson, Brandon M. Mendivil, Adeline S. Low, Joseph Carpenter, Elissa D. Pastuzyn, Hannah B. Gordon
Development of accurate disease models and discovery of immune-modulating drugs is challenged by the immune system’s highly interconnected and context-dependent nature. Here we apply deep-learning-driven analysis of cellular morphology to develop a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f9c21782616d4199bcf88ffc3650d4b4
https://doi.org/10.1101/2020.08.02.233064
https://doi.org/10.1101/2020.08.02.233064
Autor:
Ian K, Quigley, Sven, Heinz
Publikováno v:
Cold Spring Harbor protocols. 2019(5)
Hi-C is a sequencing-based method that captures three-dimensional (3-D) genome interactions by counting the interaction frequencies of pairs of genomic loci. This protocol describes the application of in situ Hi-C to the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::be2f0bc59a87dbf708251511488eb32f
https://pubmed.ncbi.nlm.nih.gov/30885966
https://pubmed.ncbi.nlm.nih.gov/30885966
Publikováno v:
Scientific Reports, Vol 8, Iss 1, Pp 1-14 (2018)
Scientific Reports
Scientific Reports
Multiciliated cells (MCCs) are specialized epithelial cells that project hundreds of motile cilia. To form these cilia, MCCs differentiate by dramatically expanding centriole number, using assembly factors required for centriole duplication during th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0df0da85f20c8fcc0b1ec96c5122da47
https://doi.org/10.1038/s41598-018-30791-1
https://doi.org/10.1038/s41598-018-30791-1
Publikováno v:
Development (Cambridge, England). 144(4)
Multiciliated cell (MCC) differentiation involves extensive organelle biogenesis required to extend hundreds of motile cilia. Key transcriptional regulators known to drive the gene expression required for this organelle biogenesis are activated by th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6cb18876492fda5e6c3a730612ee7199
https://pubmed.ncbi.nlm.nih.gov/27864379
https://pubmed.ncbi.nlm.nih.gov/27864379
Autor:
Sven Heinz, Ian K. Quigley
Publikováno v:
Cold Spring Harbor Protocols. 2019:pdb.prot098343
Hi-C is a sequencing-based method that captures three-dimensional (3-D) genome interactions by counting the interaction frequencies of pairs of genomic loci. This protocol describes the application of in situ Hi-C to the Xenopus embryo. Briefly, afte
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::314e161f3fb45e642b0ab6d57ed699af
https://doi.org/10.1101/pdb.prot098343
https://doi.org/10.1101/pdb.prot098343
Autor:
Chris Kintner, Ian K. Quigley
Publikováno v:
PLoS Genetics
PLoS Genetics, Vol 13, Iss 1, p e1006538 (2017)
PLoS Genetics, Vol 13, Iss 1, p e1006538 (2017)
Cooperative transcription factor binding at cis-regulatory sites in the genome drives robust eukaryotic gene expression, and many such sites must be coordinated to produce coherent transcriptional programs. The transcriptional program leading to moti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e635d6fb2e137b9231ca9c81c42b70be
https://doi.org/10.1101/085571
https://doi.org/10.1101/085571
Autor:
Shuji Takahashi, Yutaka Suzuki, Douglas W. Houston, Christian D. Haudenschild, Tsutomu Kinoshita, Darwin S. Dichmann, Shuuji Mawaribuchi, Masanori Taira, Jane Grimwood, Martin F. Flajnik, Yumi Izutsu, Tatsuo Michiue, Michihiko Ito, Yoko Kuroki, Yuzuru Ito, Yuko Ohta, Oleg Simakov, Ila van Kruijsbergen, Taejoon Kwon, Shengquiang Shu, Jacob O. Kitzman, Edward M. Marcotte, Adam M. Session, Yuuri Yasuoka, Sahar V. Mozaffari, Jonathan C. Stites, Jay Shendure, Minoru Watanabe, Joseph W. Carlson, Rebecca Heald, Nicholas H. Putnam, Akimasa Fukui, John B. Wallingford, Aaron M. Zorn, Kevin A. Burns, Atsushi Suzuki, Sven Heinz, Jarrod Chapman, Therese Mitros, Hajime Ogino, Georgios Georgiou, Makoto Asashima, Kamran Karimi, Uffe Hellsten, Jeremy Schmutz, Daniel S. Rokhsar, Joshua D. Fortriede, Yoshinobu Uno, Vaneet Lotay, Jerry Jenkins, Simon J. van Heeringen, Akira Hikosaka, Toshiaki Tanaka, Atsushi Toyoda, Yoshikazu Haramoto, Sarita S. Paranjpe, Chiyo Takagi, Yoichi Matsuda, Takuya Nakayama, Takamasa S. Yamamoto, Ryan Lister, Asao Fujiyama, Richard M. Harland, Ian K. Quigley, Kelly E. Miller, Louis DuPasquier, Peter D. Vize, Gert Jan C. Veenstra, Mariko Kondo, Ozren Bogdanovic, Haruki Ochi, Jessica B. Lyons, Jacques Robert, Naoto Ueno
Publikováno v:
Nature, vol 538, iss 7625
Nature, 538, 336-362
Nature, 538, pp. 336-362
Nature, 538, 336-362
Nature, 538, pp. 336-362
To explore the origins and consequences of tetraploidy in the African clawed frog, we sequenced the Xenopus laevis genome and compared it to the related diploid X. tropicalis genome. We characterize the allotetraploid origin of X. laevis by partition
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bb634b9e56d258b46c4fef0a637602ed
https://escholarship.org/uc/item/8h02q9hf
https://escholarship.org/uc/item/8h02q9hf
Autor:
Chris Kintner, Dingyuan I Sun, Ian K. Quigley, Umeet K Sajjan, Peter Walentek, Richard M. Harland
Publikováno v:
Walentek, P; Quigley, IK; Sun, DI; Sajjan, UK; Kintner, C; & Harland, RM. (2016). Ciliary transcription factors and miRNAs precisely regulate Cp110 levels required for ciliary adhesions and ciliogenesis. eLife, 5(September2016). doi: 10.7554/eLife.17557. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/0ck4x2p8
eLife, vol 5, iss September2016
eLife
eLife, Vol 5 (2016)
eLife, vol 5, iss September2016
eLife
eLife, Vol 5 (2016)
Upon cell cycle exit, centriole-to-basal body transition facilitates cilia formation. The centriolar protein Cp110 is a regulator of this process and cilia inhibitor, but its positive roles in ciliogenesis remain poorly understood. Using Xenopus we s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::33d2c9b5d2127906b42051138c84162c
http://www.escholarship.org/uc/item/0ck4x2p8
http://www.escholarship.org/uc/item/0ck4x2p8