Lifting of the 1,000 wheat exome project SNPs from Triticum aestivum cv. Chinese Spring assembly RefSeq v1.0 to RefSeq v2.1.

Autor: Vasudevan, Akshaya^1,2 (AUTHOR), Cloutier, Sylvie^1,2 (AUTHOR) sylviej.cloutier@agr.gc.ca

Publikováno v: BMC Research Notes. 9/14/2023, Vol. 16 Issue 1, p1-5. 5p.

Exome‐based new allele‐specific PCR markers and transferability for sodicity tolerance in bread wheat (Triticum aestivum L.)

Autor: Roopali Bhoite, Rosemary Smith, Urmil Bansal, Mirza Dowla, Harbans Bariana, Darshan Sharma

Publikováno v: Plant Direct, Vol 7, Iss 8, Pp n/a-n/a (2023)

Abstract Targeted exome‐based genotype by sequencing (t‐GBS), a sequencing technology that tags SNPs and haplotypes in gene‐rich regions was used in previous genome‐wide association studies (GWAS) for sodicity tolerance in bread wheat. Thirty

Externí odkaz: https://doaj.org/article/094151ddd00746f48cf2d1166a168de4

IWGSC Sequence Repository: Moving towards tools to facilitate data integration for the reference sequence of wheat

Autor: Alaux, Michael, Letellier, Thomas, ALFAMA-DEPAUW, Françoise, Jamilloux, Veronique, Rogers, Jane, Choulet, Frédéric, GUERCHE, Claire, LOAEC, Mikaël, Flores, Raphaël-Gauthier, Michotey, Célia, Adam-Blondon, Anne-Francoise, Paux, Etienne, Eversole, Kellye, Quesneville, Hadi

Publikováno v: PAG XXIV-Plant and Animal Genome Conference
PAG XXIV-Plant and Animal Genome Conference, Jan 2016, San Diego, United States
PAG XXIV-Plant and Animal Genome Conference, San Diego, USA, 2016-01-09-2016-01-13

URGI is a genomics and bioinformatics research unit at INRA (French National institute for Agricultural Research), dedicated to plants and crop parasites. We develop and maintain a genomic and genetic Information System called GnpIS that manages mult

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::a90efc266edb8632f5430bbaf40493dc
https://hal.archives-ouvertes.fr/hal-01266518

In silico curation of QTL-rich clusters and candidate gene identification for plant height of bread wheat.

Autor: Dengan Xu¹, Chenfei Jia¹, Xinru Lyu¹, Tingzhi Yang¹, Huimin Qin¹, Yalin Wang¹, Qianlin Hao¹, Wenxing Liu¹, Xuehuan Dai¹, Jianbin Zeng¹, Hongsheng Zhang¹, Xianchun Xia², Zhonghu He², Shuanghe Cao², Wujun Ma¹ Wujun.Ma@qau.edu.cn

Publikováno v: Crop Journal (2095-5421). Oct2023, Vol. 11 Issue 5, p1480-1490. 11p.

IWGSC sequence repository : how to facilitate pseudomolecule assembly?

Autor: Alaux, Michael, Choulet, Frédéric, Couderc, Loïc, ALFAMA-DEPAUW, Françoise, Jamilloux, Veronique, Letellier, Thomas, Flores, Raphaël-Gauthier, GUERCHE, Claire, LOAEC, Mikaël, Paux, Etienne, Steinbach, Delphine, Quesneville, Hadi

Publikováno v: PAG XXIII-Plant and Animal Genome Conference
PAG XXIII-Plant and Animal Genome Conference, Jan 2015, San Diego, United States
Plant & animal genome XXIII, San Diego, United States, January 10-14, 2015. 2015; PAG XXIII-Plant and Animal Genome Conference, San Diego, USA, 2015-01-10-2015-01-14, 1 p.

International audience

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::f2c958f220eb2667713c444689996118
https://hal.inrae.fr/hal-02741662/file/2015_Alaux_PAG_XXIII_1.pdf