Zobrazeno 1 - 10
of 35
pro vyhledávání: '"II. Protein sequence and structure, motifs and domains"'
Autor:
Julien Mariethoz, Robyn Peterson, Elisabeth Gasteiger, Frédérique Lisacek, Yukie Akune, Nicolle H. Packer, Matthew Campbell, Kiyoko F. Aoki-Kinoshita
Publikováno v:
Europe PubMed Central
Nucleic Acids Research
Nucleic acids research, Vol. 42, No D1 (2014) pp. D215-D221
Nucleic Acid Research
Nucleic Acids Research
Nucleic acids research, Vol. 42, No D1 (2014) pp. D215-D221
Nucleic Acid Research
The UniCarb KnowledgeBase (UniCarbKB; http://unicarbkb.org) offers public access to a growing, curated database of information on the glycan structures of glycoproteins. UniCarbKB is an international effort that aims to further our understanding of s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b6a4fd402095efa4d1366206507f5ef0
http://doc.rero.ch/record/293871/files/gkt1128.pdf
http://doc.rero.ch/record/293871/files/gkt1128.pdf
Autor:
Giovanni Minervini, Tomás Di Domenico, Andrey V. Kajava, R. Gonzalo Parra, Carlo Ferrari, Silvio C. E. Tosatto, Awais Ihsan, Ian Walsh, Manuel Giollo, Emilio Potenza, Damiano Piovesan
Publikováno v:
Nucleic Acids Research
RepeatsDB (http://repeatsdb.bio.unipd.it/) is a database of annotated tandem repeat protein structures. Tandem repeats pose a difficult problem for the analysis of protein structures, as the underlying sequence can be highly degenerate. Several repea
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8328038fe7cb99c171242e64614c3c96
https://doi.org/10.1093/nar/gkt1175
https://doi.org/10.1093/nar/gkt1175
Autor:
Renata C. Geer, Aron Marchler-Bauer, Paul A. Thiessen, Christopher J. Lanczycki, Stephen H. Bryant, Dachuan Zhang, Thomas Madej
Publikováno v:
Nucleic Acids Research
The computational detection of similarities between protein 3D structures has become an indispensable tool for the detection of homologous relationships, the classification of protein families and functional inference. Consequently, numerous algorith
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b6a5a035130f43853ad19cabb72f0457
http://europepmc.org/articles/PMC3965051
http://europepmc.org/articles/PMC3965051
Autor:
Christian von Mering, Peer Bork, Damian Szklarczyk, Lars Juhl Jensen, Sune Pletscher-Frankild, Michael Kuhn, Thomas Blicher
Publikováno v:
Nucleic Acids Research
STITCH is a database of protein-chemical interactions that integrates many sources of experimental and manually curated evidence with text-mining information and interaction predictions. Available at http://stitch.embl.de, the resulting interaction n
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b0b53ca8e4373af4d93b6540f76612a8
https://doi.org/10.1093/nar/gkt1207
https://doi.org/10.1093/nar/gkt1207
Autor:
Miguel A. Hernández-Prieto, Rui S. R. Machado, Matthias E. Futschik, José P. Pinto, Dulce Maria Gomes de Almeida, Ravi Kiran Reddy Kalathur, Gautam Chaurasia
Publikováno v:
Nucleic Acids Research
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP
Unified Human Interactome (UniHI) (http://www.unihi.org) is a database for retrieval, analysis and visualization of human molecular interaction networks. Its primary aim is to provide a comprehensive and easy-to-use platform for network-based investi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::31a8524367a71017c0fa892a26f2fb1a
https://doi.org/10.1093/nar/gkt1100
https://doi.org/10.1093/nar/gkt1100
Publikováno v:
Nucleic Acids Research
Protein domains are functionally and structurally independent modules, which add to the functional variety of proteins. This array of functional diversity has been enabled by evolutionary changes, such as amino acid substitutions or insertions or del
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a11651485d2fca6eb384f9556eab4e91
https://doi.org/10.1093/nar/gkt1014
https://doi.org/10.1093/nar/gkt1014
Autor:
Yong Zhang, Jinyan Huang, Qian Qin, Juan Wang, Hanfei Sun, Shenglin Mei, Xiaoqin Yang, X. Shirley Liu, Qian Wang, Qixuan Wang, Chengchen Zhao, Liu Jing
Publikováno v:
Nucleic Acids Research
Diversified histone modifications (HMs) are essential epigenetic features. They play important roles in fundamental biological processes including transcription, DNA repair and DNA replication. Chromatin regulators (CRs), which are indispensable in e
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b5898674e9b63e20799098e75f14f1a7
http://europepmc.org/articles/PMC3965064
http://europepmc.org/articles/PMC3965064
Autor:
Borisas Bursteinas, L-S Yeh, Klemens Pichler, Guillaume Keller, C Casal-Casas, Gerritsen, A Da Silva, Prudence Mutowo, Xavier D. Martin, Peter B. McGarvey, Volynkin, J Lew, K Sonesson, M. C. Blatter, L Pureza, Rodrigo Lopez, Anne Estreicher, Alex Bateman, Ramona Britto, A-L Veuthey, Penelope Garmiri, Patrick Masson, Baris E. Suzek, Cathy H. Wu, Paul Gane, Maria Jesus Martin, Shyamala Sundaram, Yasmin Alam-Faruque, Ioannis Xenarios, Alan Bridge, WM Chan, Guoying Qi, L Famiglietti, Christian J. A. Sigrist, Nadine Gruaz-Gumowski, Chantal Hulo, Hermann Zellner, Matthew Corbett, Monica Pozzato, Thierry Lombardot, S Staehli, Jerven Bolleman, Sylvain Poux, Séverine Duvaud, Tony Sawford, Chuming Chen, Xavier Watkins, Yuqi Wang, Elisabeth Gasteiger, Kati Laiho, Qinghua Wang, M Bingley, Lydie Bougueleret, Kristian B. Axelsen, Yongxing Chen, Salvo Paesano, Andrew Nightingale, Nicole Redaschi, Emma Hatton-Ellis, John S. Garavelli, Delphine Baratin, Darren A. Natale, Gayatri Chavali, E de Castro, Leslie Arminski, Damien Lieberherr, Elena Cibrian-Uhalte, Catherine Rivoire, Bernd Roechert, Yerramalla, Hongzhan Huang, Alistair MacDougall, Edd Turner, Maria Victoria Schneider, Aleksandra Shypitsyna, Jie Zhang, Michele Magrane, Dolnide Dornevil, Lara, M Donnelly, F. Fazzini, Andrea H. Auchincloss, Emanuele Alpi, Benoit Bely, Brigitte Boeckmann, Rolf Apweiler, Rachael P. Huntley, Lionel Breuza, Sangya Pundir, Lorenzo Cerutti, Tunca Doğan, EB Casanova, P van Rensburg, Rabie Saidi, Jie Luo, Mickael Goujon, Laure Verbregue, Tony Wardell, W Liu, Andre Stutz, P Lemercier, Hamish McWilliam, Ivo Pedruzzi, P-A Binz, Sebastien Gehant, Béatrice A. Cuche, Carlos Bonilla, Duncan Legge, C. R. Vinayaka, Anne Morgat, Diego Poggioli, J Arganiska, Teresa Batista Neto, Emmanuel Boutet, Florence Jungo, Ursula Hinz, Parit Bansal, Sandra Orchard, Ricardo Antunes, Manuela Pruess, M Feuermann, S. Rosanoff, Claire O'Donovan, Cecilia N. Arighi, J. James, M Doche, Elisabeth Coudert, M De Giorgi, Reija Hieta, Sandrine Pilbout, Arnaud Gos, Michael Tognolli, Leyla Jael Garcia Castro, Lucila Aimo
Publikováno v:
Nucleic Acids Research
The mission of the Universal Protein Resource (UniProt) (http://www.uniprot.org) is to provide the scientific community with a comprehensive, high-quality and freely accessible resource of protein sequences and functional annotation. It integrates, i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dacc18afba0dcb8db8d93542e3ba0bff
http://europepmc.org/articles/PMC3965022
http://europepmc.org/articles/PMC3965022
Autor:
Alice R. Wattam, James J. Davis, Bruce Parrello, Robert Olson, Gordon D. Pusch, Ross Overbeek, Veronika Vonstein, Rick Stevens, Terry Disz, Maulik Shukla, Svetlana Gerdes, Fangfang Xia, Gary J. Olsen, Robert Edwards
Publikováno v:
Nucleic Acids Research
In 2004, the SEED (http://pubseed.theseed.org/) was created to provide consistent and accurate genome annotations across thousands of genomes and as a platform for discovering and developing de novo annotations. The SEED is a constantly updated integ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::46857bff84c054ba7ae25b0748e5eb53
http://europepmc.org/articles/PMC3965101
http://europepmc.org/articles/PMC3965101
Autor:
Jg, Lees, Lee D, Romain A Studer, Nl, Dawson, Sillitoe I, Das S, Yeats C, Bh, Dessailly, Rentzsch R, Ca, Orengo
Publikováno v:
Nucleic Acids Research
Europe PubMed Central
Europe PubMed Central
Gene3D (http://gene3d.biochem.ucl.ac.uk) is a database of protein domain structure annotations for protein sequences. Domains are predicted using a library of profile HMMs from 2738 CATH superfamilies. Gene3D assigns domain annotations to Ensembl and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::f4deeacb2f49ac0bc832c50420a5f9e4
http://europepmc.org/articles/PMC3965083
http://europepmc.org/articles/PMC3965083