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pro vyhledávání: '"Humphrys, MS"'
Dual RNA-seq experiments examining viral and bacterial pathogens are increasing, but vary considerably in their experimental designs, such as infection rates and RNA depletion methods. Here, we have applied dual RNA-seq to Chlamydia trachomatis infec
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______363::17fe4e27d1b262f71eeee808a0a81a82
https://hdl.handle.net/10453/143872
https://hdl.handle.net/10453/143872
Chlamydia are Gram-negative, obligate intracellular bacterial pathogens responsible for a broad spectrum of human and animal diseases. In humans, Chlamydia trachomatis is the most prevalent bacterial sexually transmitted infection worldwide and is th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______363::0b2b8c59925e82655e055efea042efec
https://hdl.handle.net/10453/143846
https://hdl.handle.net/10453/143846
© Springer Science+Business Media, LLC, part of Springer Nature 2019. During the infection of a host cell by a bacterial pathogen, a cascading series of gene expression changes occurs as each organism manipulates or responds to the other via defense
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______363::1e9b6552b71ae185936e78f698eba18e
https://hdl.handle.net/10453/138837
https://hdl.handle.net/10453/138837
Autor:
Tuddenham S; Division of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, MD., Shafiq M; Department of Epidemiology, Columbia University Mailman School of Public Health, New York, NY., Mathad JS; Department of Medicine, Weill Cornell Medical College, New York, NY., Alexander M; Byramjee Jeejeebhoy Government Medical College-Johns Hopkins University Clinical Research Site, Pune, India., Naik S; Department of Obstetrics and Gynecology, Byramjee Jeejeebhoy Government Medical College, Pune, India., Kulkarni V; Byramjee Jeejeebhoy Government Medical College-Johns Hopkins University Clinical Research Site, Pune, India., Deshpande P; Byramjee Jeejeebhoy Government Medical College-Johns Hopkins University Clinical Research Site, Pune, India., Humphrys MS; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD., Holm JB; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD., Khan N; Byramjee Jeejeebhoy Government Medical College-Johns Hopkins University Clinical Research Site, Pune, India., Yadana S; Department of Epidemiology, Columbia University Mailman School of Public Health, New York, NY., Cheedalla A; Ohio State University School of Medicine, Columbus, OH; and., Bhosale R; Department of Obstetrics and Gynecology, Byramjee Jeejeebhoy Government Medical College, Pune, India., Ghanem KG; Division of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, MD., Wang T; Department of Biostatistics, Columbia University Mailman School of Public Health, New York, NY., Wang S; Department of Biostatistics, Columbia University Mailman School of Public Health, New York, NY., Ma B; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD., Ravel J; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD., Gupta A; Division of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, MD., Shivakoti R; Department of Epidemiology, Columbia University Mailman School of Public Health, New York, NY.
Publikováno v:
Journal of acquired immune deficiency syndromes (1999) [J Acquir Immune Defic Syndr] 2023 Aug 15; Vol. 93 (5), pp. 422-430.
Autor:
France MT; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA., Fu L; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA., Rutt L; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA., Yang H; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA., Humphrys MS; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA., Narina S; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA., Gajer PM; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA., Ma B; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA., Forney LJ; Department of Biological Sciences and Institute for Bioinformatics and Evolutionary Studies, University of Idaho, Moscow, ID, USA., Ravel J; Institute for Genome Sciences and Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA. jravel@som.umaryland.edu.
Publikováno v:
Genome biology [Genome Biol] 2022 Mar 01; Vol. 23 (1), pp. 66. Date of Electronic Publication: 2022 Mar 01.
Autor:
Hayward RJ; The iThree Institute, Faculty of Science, University of Technology Sydney, Sydney, Australia. Regan.Hayward@helmholtz-hiri.de.; Helmholtz Centre for Infection Research (HZI), Helmholtz Institute for RNA-based Infection Research (HIRI), Würzburg, Germany. Regan.Hayward@helmholtz-hiri.de., Humphrys MS; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA., Huston WM; School of Life Sciences, Faculty of Science, University of Technology Sydney, Sydney, Australia., Myers GSA; The iThree Institute, Faculty of Science, University of Technology Sydney, Sydney, Australia.; School of Life Sciences, Faculty of Science, University of Technology Sydney, Sydney, Australia.
Publikováno v:
Scientific reports [Sci Rep] 2021 May 17; Vol. 11 (1), pp. 10399. Date of Electronic Publication: 2021 May 17.
Autor:
France MT; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, USA., Ma B; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, USA., Gajer P; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, USA., Brown S; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.; Department of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, USA., Humphrys MS; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, USA., Holm JB; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, USA., Waetjen LE; Department of Obstetrics and Gynecology, University of California Davis School of Medicine, Sacramento, USA., Brotman RM; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.; Department of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, USA., Ravel J; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA. jravel@som.umaryland.edu.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, USA. jravel@som.umaryland.edu.
Publikováno v:
Microbiome [Microbiome] 2020 Nov 23; Vol. 8 (1), pp. 166. Date of Electronic Publication: 2020 Nov 23.
Autor:
France MT; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA., Rutt L; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA., Narina S; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA., Arbaugh S; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA., McComb E; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA., Humphrys MS; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA., Ma B; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA., Hayward MR; Ragon Institute of MGH, MIT, and Harvard, Cambridge, Massachusetts, USA., Costello EK; Division of Infectious Diseases & Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, California, USA.; Department of Microbiology & Immunology, Stanford University School of Medicine, Stanford, California, USA.; Infectious Diseases Section, Veterans Affairs Palo Alto Health Care System, Palo Alto, California, USA., Relman DA; Division of Infectious Diseases & Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, California, USA.; Department of Microbiology & Immunology, Stanford University School of Medicine, Stanford, California, USA.; Infectious Diseases Section, Veterans Affairs Palo Alto Health Care System, Palo Alto, California, USA., Kwon DS; Ragon Institute of MGH, MIT, and Harvard, Cambridge, Massachusetts, USA.; Division of Infectious Diseases, Massachusetts General Hospital, Boston, Massachusetts, USA., Ravel J; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA jravel@som.umaryland.edu.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Publikováno v:
Microbiology resource announcements [Microbiol Resour Announc] 2020 May 14; Vol. 9 (20). Date of Electronic Publication: 2020 May 14.
Autor:
Ma B; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., France MT; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Crabtree J; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Holm JB; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Humphrys MS; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Brotman RM; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.; Department of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Ravel J; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA. jravel@som.umaryland.edu.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA. jravel@som.umaryland.edu.
Publikováno v:
Nature communications [Nat Commun] 2020 Feb 26; Vol. 11 (1), pp. 940. Date of Electronic Publication: 2020 Feb 26.
Autor:
Tamarelle J; Unité Mixte de Recherche 1181 , Université Versailles-Saint-Quentin-en-Yvelines, Institut Pasteur, Institut National de la Santé et de la Recherche Médicale, Paris, France., Ma B; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA., Gajer P; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA., Humphrys MS; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA., Terplan M; Department of Obstetrics and Gynecology, University of Maryland School of Medicine, Baltimore, Maryland, USA, Department of Obstetrics and Gynecology, University of Maryland School of Medicine, Baltimore, Maryland, USA., Mark KS; Department of Obstetrics and Gynecology, University of Maryland School of Medicine, Baltimore, Maryland, USA, Department of Obstetrics and Gynecology, University of Maryland School of Medicine, Baltimore, Maryland, USA., Thiébaut ACM; Unité Mixte de Recherche 1181 , Université Versailles-Saint-Quentin-en-Yvelines, Institut Pasteur, Institut National de la Santé et de la Recherche Médicale, Paris, France., Forney LJ; Department of Biological Sciences, University of Idaho, Moscow, Idaho, USA., Brotman RM; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, Maryland, USA., Delarocque-Astagneau E; Unité Mixte de Recherche 1181 , Université Versailles-Saint-Quentin-en-Yvelines, Institut Pasteur, Institut National de la Santé et de la Recherche Médicale, Paris, France., Bavoil PM; Department of Microbial Pathogenesis, University of Maryland School of Dentistry, Baltimore, Maryland, USA., Ravel J; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Publikováno v:
The Journal of infectious diseases [J Infect Dis] 2020 Feb 03; Vol. 221 (4), pp. 627-635.