Zobrazeno 1 - 10
of 21
pro vyhledávání: '"Hubschle, Hermann"'
Autor:
Goldstein, Leonard, Ying-Jiun Chen, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Wenlin Yuan, Jingli Zhang, Stinson, Jeremy, Bijay Jaiswal, Pahuja, Kanika, Ishminder Mann, Schaal, Thomas, Chan, Leo, Sangeetha Anandakrishnan, Chun-Wah Lin, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Karthikeyan Swaminathan, Wei, Sherry, Maithreyan Srinivasan, Somasekar Seshagiri, Modrusan, Zora
Well-to-well variation in the number of reads and detected transcripts for Ba/F3 cells. (a) Number of mapped reads plotted against number of sequenced reads for each well. (b) Number of detected transcripts plotted against number of sequenced reads f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d7c568596958c8cef9e0f5cc674ce700
Autor:
Goldstein, Leonard, Ying-Jiun Chen, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Wenlin Yuan, Jingli Zhang, Stinson, Jeremy, Bijay Jaiswal, Pahuja, Kanika, Ishminder Mann, Schaal, Thomas, Chan, Leo, Sangeetha Anandakrishnan, Chun-Wah Lin, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Karthikeyan Swaminathan, Wei, Sherry, Maithreyan Srinivasan, Somasekar Seshagiri, Modrusan, Zora
Hierarchical clustering of (a) human and (b) mouse cell lines based on 100 most variable genes. (PDF 1272Â kb)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::bd02fac88395fe89230c0d4ade296dab
Autor:
Goldstein, Leonard, Ying-Jiun Chen, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Wenlin Yuan, Jingli Zhang, Stinson, Jeremy, Bijay Jaiswal, Pahuja, Kanika, Ishminder Mann, Schaal, Thomas, Chan, Leo, Sangeetha Anandakrishnan, Chun-Wah Lin, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Karthikeyan Swaminathan, Wei, Sherry, Maithreyan Srinivasan, Somasekar Seshagiri, Modrusan, Zora
Heatmaps illustrating the total number of detected transcripts for each well selected for downstream processing. Data are for three microchips, each with 5184 wells arranged in a 72Â Ă Â 72 square layout. Microchips 72,618 and 72,598 were used for
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::20b6361824ba3e053f33ad12b715987c
Autor:
Goldstein, Leonard, Ying-Jiun Chen, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Wenlin Yuan, Jingli Zhang, Stinson, Jeremy, Bijay Jaiswal, Pahuja, Kanika, Ishminder Mann, Schaal, Thomas, Chan, Leo, Sangeetha Anandakrishnan, Chun-Wah Lin, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Karthikeyan Swaminathan, Wei, Sherry, Maithreyan Srinivasan, Somasekar Seshagiri, Modrusan, Zora
Checkerboard assay. (a) Image of a microchip where the right half contains negative control master mix (NTC wells, n = 2520) and the left half contains lambda DNA master mix master (Positive wells, n = 1024) and negative control master mix (Test well
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5466fbf51df77e812b18bc771f5dad92
Autor:
Goldstein, Leonard, Ying-Jiun Chen, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Wenlin Yuan, Jingli Zhang, Stinson, Jeremy, Bijay Jaiswal, Pahuja, Kanika, Ishminder Mann, Schaal, Thomas, Chan, Leo, Sangeetha Anandakrishnan, Chun-Wah Lin, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Karthikeyan Swaminathan, Wei, Sherry, Maithreyan Srinivasan, Somasekar Seshagiri, Modrusan, Zora
Percentage of mitochondrial transcripts plotted against total number of detected transcripts for mouse Ba/F3 cells (a), human cell lines (b), mouse cell lines (c), and pancreatic islets (d). Dashed lines indicate the minimum number of detected transc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::81092b07ad7890e302280541991a5bdc
Autor:
Goldstein, Leonard, Ying-Jiun Chen, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Wenlin Yuan, Jingli Zhang, Stinson, Jeremy, Bijay Jaiswal, Pahuja, Kanika, Ishminder Mann, Schaal, Thomas, Chan, Leo, Sangeetha Anandakrishnan, Chun-Wah Lin, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Karthikeyan Swaminathan, Wei, Sherry, Maithreyan Srinivasan, Somasekar Seshagiri, Modrusan, Zora
Effect of requiring a minimum number of reads per UMI on single-cell purity. Shown are data for the species-mixing experiment when considering UMIs supported by a minimum of 1, 2 or 3 reads. Single-cell purity estimates are shown in each panel. Other
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ced9a9f67bb30ee996243565092f4fec
Autor:
Goldstein, Leonard, Ying-Jiun Chen, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Wenlin Yuan, Jingli Zhang, Stinson, Jeremy, Bijay Jaiswal, Pahuja, Kanika, Ishminder Mann, Schaal, Thomas, Chan, Leo, Sangeetha Anandakrishnan, Chun-Wah Lin, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Karthikeyan Swaminathan, Wei, Sherry, Maithreyan Srinivasan, Somasekar Seshagiri, Modrusan, Zora
Unsupervised principal component analysis (PCA) for mouse pancreatic islet cells based on the 500 most variable genes. Circles correspond to cells and are colored by (a) microchip (n = 116 for 72574, n = 352 for 72625) and (b) transcript counts of ce
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6bb81aa35f82ba7183063583774aad87
Autor:
Goldstein, Leonard, Ying-Jiun Chen, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Wenlin Yuan, Jingli Zhang, Stinson, Jeremy, Bijay Jaiswal, Pahuja, Kanika, Ishminder Mann, Schaal, Thomas, Chan, Leo, Sangeetha Anandakrishnan, Chun-Wah Lin, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Karthikeyan Swaminathan, Wei, Sherry, Maithreyan Srinivasan, Somasekar Seshagiri, Modrusan, Zora
Overview of single-cell RNA-seq workflow on the ICELL8 system with detailed information on each processing step, including the time required for completion. (PDF 80Â kb)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::03a0dc884a30bed029bdf8673401fba2
Autor:
Goldstein, Leonard, Ying-Jiun Chen, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Wenlin Yuan, Jingli Zhang, Stinson, Jeremy, Bijay Jaiswal, Pahuja, Kanika, Ishminder Mann, Schaal, Thomas, Chan, Leo, Sangeetha Anandakrishnan, Chun-Wah Lin, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Karthikeyan Swaminathan, Wei, Sherry, Maithreyan Srinivasan, Somasekar Seshagiri, Modrusan, Zora
Cell-to-cell variability and comparison of single-cell ensemble versus bulk expression. (a) Scatter plot of per-gene transcript counts for two Ba/F3 cells. (b) Scatter plot of per-gene read counts for two Ba/F3 cells shown in (a). (c) Scatter plot of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e65ed771a6ccf2852e6033c8c04bca6f
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