Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Hubert Santuz"'
Publikováno v:
Algorithms, Vol 15, Iss 11, p 415 (2022)
(1) Background: We developed an algorithm to perform interactive molecular simulations (IMS) of protein alignment in membranes, allowing on-the-fly monitoring and manipulation of such molecular systems at various scales. (2) Methods: UnityMol, an adv
Externí odkaz:
https://doaj.org/article/bfdf21acfee040e3ad6b345773f56359
Autor:
Jonathan Barnoud, Hubert Santuz, Pierrick Craveur, Agnel Praveen Joseph, Vincent Jallu, Alexandre G. de Brevern, Pierre Poulain
Publikováno v:
PeerJ, Vol 5, p e4013 (2017)
This paper describes the development and application of a suite of tools, called PBxplore, to analyze the dynamics and deformability of protein structures using Protein Blocks (PBs). Proteins are highly dynamic macromolecules, and a classical way to
Externí odkaz:
https://doaj.org/article/d5495b4dbe5f4417a7e06af766ba7316
Publikováno v:
ACS chemical neuroscience. 13(6)
Aggregation of amyloid-β (Aβ42) protein is one hallmark of Alzheimer's disease, and the conformations of the smallest Aβ42 oligomers are largely unknown. Here, we explore the application of the deep learning AlphaFold2 method to the structure dete
Autor:
Arthur Hardiagon, Xavier Martinez, Hubert Santuz, Mihail Barboiu, Fabio Sterpone, Samuel Murail, Marc Baaden
Publikováno v:
Lecture Notes in Bioengineering / Advances in Bionanomaterials IISelected Papers from the 3rd International Conference on Bio and Nanomaterials, BIONAM 2019, September 29 – October 3, 2019
Lecture Notes in Bioengineering / Advances in Bionanomaterials II Selected Papers from the 3rd International Conference on Bio and Nanomaterials, BIONAM 2019, September 29 – October 3, 2019, pp.78-99, 2020, ⟨10.1007/978-3-030-47705-9_8⟩
Advances in Bionanomaterials II ISBN: 9783030477042
Lecture Notes in Bioengineering / Advances in Bionanomaterials II Selected Papers from the 3rd International Conference on Bio and Nanomaterials, BIONAM 2019, September 29 – October 3, 2019, pp.78-99, 2020, ⟨10.1007/978-3-030-47705-9_8⟩
Advances in Bionanomaterials II ISBN: 9783030477042
International audience; In biology, metabolite transport across cell membranes occurs through natural channels and pores. Artificial ion-channel architectures represent potential mimics of natural ionic conduction. Many such systems were produced lea
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e130909379fb61abec05e5027133e192
https://hal.science/hal-02944941/document
https://hal.science/hal-02944941/document
Publikováno v:
Journal of Open Source Software
Journal of Open Source Software, 2021, 6 (65), pp.3521. ⟨10.21105/joss.03521⟩
Journal of Open Source Software, Open Journals, 2021, 6 (65), pp.3521. ⟨10.21105/joss.03521⟩
Journal of Open Source Software, 2021, 6 (65), pp.3521. ⟨10.21105/joss.03521⟩
Journal of Open Source Software, Open Journals, 2021, 6 (65), pp.3521. ⟨10.21105/joss.03521⟩
International audience
Autor:
Catia Pereira, Karim El Kirat, Olivier Hermine, Caroline Le Van Kim, Sandrine Morandat, Hubert Santuz, Pascal Amireault, Francine Côté, Slim Azouzi, Yves Colin, Catherine Etchebest
Publikováno v:
Biophysical Journal
Biophysical Journal, Biophysical Society, 2017, 112 (9), pp.1863-1873. ⟨10.1016/j.bpj.2017.03.037⟩
Biophysical Journal, Biophysical Society, 2017, 112 (9), pp.1863-1873. ⟨10.1016/j.bpj.2017.03.037⟩
Serotonin (5-hydroxytryptamine, 5-HT) is a well-known neurotransmitter that is involved in a growing number of functions in peripheral tissues. Recent studies have shown nonpharmacological functions of 5-HT linked to its chemical properties. Indeed,
Autor:
Tarun Jairaj Narwani, Alexandre G. de Brevern, Catherine Etchebest, Joseph Rebehmed, Nicolas K. Shinada, Pierrick Craveur, Hubert Santuz
Publikováno v:
20e congrès du GGMM (groupe de graphisme et modélisation moléculaire)
20e congrès du GGMM (groupe de graphisme et modélisation moléculaire), May 2017, Reims, France
Archives of Biological Sciences, Vol 70, Iss 1, Pp 21-31 (2018)
BASE-Bielefeld Academic Search Engine
Archives of Biological Science
Archives of Biological Science, Srpsko Bioloko Drutvo, 2018, 70 (1), pp.21-31. ⟨10.2298/ABS170215022N⟩
Archives of Biological Science, 2018, 70 (1), pp.21-31. ⟨10.2298/ABS170215022N⟩
20e congrès du GGMM (groupe de graphisme et modélisation moléculaire), May 2017, Reims, France
Archives of Biological Sciences, Vol 70, Iss 1, Pp 21-31 (2018)
BASE-Bielefeld Academic Search Engine
Archives of Biological Science
Archives of Biological Science, Srpsko Bioloko Drutvo, 2018, 70 (1), pp.21-31. ⟨10.2298/ABS170215022N⟩
Archives of Biological Science, 2018, 70 (1), pp.21-31. ⟨10.2298/ABS170215022N⟩
International audience; Protein structures are often represented as seen in crystals as (i) rigid macromolecules (ii) with helices, sheets and coils. However, both definitions are partial because (i) proteins are highly dynamic macromolecules and (ii
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::97538e5a8c974307def473830db5f83c
https://www.hal.inserm.fr/inserm-01581259
https://www.hal.inserm.fr/inserm-01581259
Autor:
Alexandre G. de Brevern, Nicolas K. Shinada, Tarun Jairaj Narwani, Narayanasamy Srinivasan, Akhila Melarkode Vattekatte, Jean-Christophe Gelly, Yassine Ghouzam, Hubert Santuz
Publikováno v:
Amino Acids
Amino Acids, Springer Verlag, 2017, 49 (4), pp.705-713. ⟨10.1007/s00726-017-2385-6⟩
Amino Acids, Springer Verlag, 2017, 49 (4), pp.705-713. ⟨10.1007/s00726-017-2385-6⟩
International audience; About half of the globular proteins are composed of regular secondary structures, α-helices, and β-sheets, while the rest are constituted of irregular secondary structures, such as turns or coil conformations. Other regular
Publikováno v:
PLoS ONE, Vol 14, Iss 2, p e0211043 (2019)
PLoS ONE
PLoS ONE
The Red Blood Cell (RBC) is a metabolically-driven cell vital for processes such a gas transport and homeostasis. RBC possesses at its surface exposing antigens proteins that are critical in blood transfusion. Due to their importance, numerous studie
Autor:
Waldemar Kulig, Alexander P. Lyubartsev, Luca Monticelli, Matej Kanduč, Patrick F.J. Fuchs, Hubert Santuz, Jukka Määttä, Joona Tynkkynen, Antti Lamberg, Fernando Favela-Rosales, Marius Retegan, Tomasz Róg, Matti Javanainen, Claire Loison, O. H. Samuli Ollila, Markus S. Miettinen, Alexandru Botan
Publikováno v:
Journal of Physical Chemistry B
Journal of Physical Chemistry B, American Chemical Society, 2015, 119 (49), pp.15075-15088. ⟨10.1021/acs.jpcb.5b04878⟩
The Journal of Physical Chemistry. B
Journal of Physical Chemistry B, American Chemical Society, 2015, 119 (49), pp.15075-15088. ⟨10.1021/acs.jpcb.5b04878⟩
The Journal of Physical Chemistry. B
Phospholipids are essential building blocks of biological membranes. Despite a vast amount of very accurate experimental data, the atomistic resolution structures sampled by the glycerol backbone and choline headgroup in phoshatidylcholine bilayers a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::43eed8340fc2af510fc78afeb3b58a6e
https://refubium.fu-berlin.de/handle/fub188/16464
https://refubium.fu-berlin.de/handle/fub188/16464