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Regulatory enhancer profiling of mesenchymal-type gastric cancer reveals subtype-specific epigenomic landscapes and targetable vulnerabilities

Autor: Ho, Shamaine Wei Ting, Sheng, Taotao, Xing, Manjie, Ooi, Wen Fong, Xu, Chang, Sundar, Raghav, Huang, Kie Kyon, Li, Zhimei, Kumar, Vikrant, Ramnarayanan, Kalpana, Zhu, Feng, Srivastava, Supriya, Isa, Zul Fazreen Bin Adam, Anene-Nzelu, Chukwuemeka George, Razavi-Mohseni, Milad, Shigaki, Dustin, Ma, Haoran, Tan, Angie Lay Keng, Ong, Xuewen, Lee, Ming Hui, Tay, Su Ting, Guo, Yu Amanda, Huang, Weitai, Li, Shang, Beer, Michael A., Foo, Roger Sik Yin, Teh, Ming, Skanderup, Anders Jacobsen, Teh, Bin Tean, Tan, Patrick

Publikováno v: Gut; 2023, Vol. 72 Issue: 2 p226-241, 16p

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SMuRF: portable and accurate ensemble prediction of somatic mutations.

Autor: Huang, Weitai, Guo, Yu Amanda, Muthukumar, Karthik, Baruah, Probhonjon, Chang, Mei Mei, Skanderup, Anders Jacobsen

Publikováno v: Bioinformatics; Sep2019, Vol. 35 Issue 17, p3157-3159, 3p

Accurate Ensemble Prediction of Somatic Mutations with SMuRF2.

Autor: Huang W; Laboratory of Computational Cancer Genomics, Genome Institute of Singapore, A*STAR (Agency for Science, Technology and Research), Singapore, Singapore. huangwt@gis.a-star.edu.sg., Sim NL; Laboratory of Computational Cancer Genomics, Genome Institute of Singapore, A*STAR (Agency for Science, Technology and Research), Singapore, Singapore., Skanderup AJ; Laboratory of Computational Cancer Genomics, Genome Institute of Singapore, A*STAR (Agency for Science, Technology and Research), Singapore, Singapore.

Publikováno v: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2022; Vol. 2493, pp. 53-66.