Zobrazeno 1 - 10
of 47
pro vyhledávání: '"Hua-Hao Zhang"'
Autor:
Min-Rui-Xuan Xu, Zhen-Yang Liao, Jordan R. Brock, Kang Du, Guo-Yin Li, Zhi-Qiang Chen, Ying-Hao Wang, Zhong-Nan Gao, Gaurav Agarwal, Kevin H-C Wei, Feng Shao, Shuai Pang, Adrian E. Platts, Jozefien van de Velde, Hong-Min Lin, Scott J. Teresi, Kevin Bird, Chad E. Niederhuth, Jin-Gen Xu, Guo-Hua Yu, Jian-Yuan Yang, Si-Fa Dai, Andrew Nelson, Ingo Braasch, Xiao-Gu Zhang, Manfred Schartl, Patrick P. Edger, Min-Jin Han, Hua-Hao Zhang
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-19 (2023)
Abstract Teleost fishes, which are the largest and most diverse group of living vertebrates, have a rich history of ancient and recent polyploidy. Previous studies of allotetraploid common carp and goldfish (cyprinids) reported a dominant subgenome,
Externí odkaz:
https://doaj.org/article/bdc72ca6f97844e890cc3def994d2eef
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-10 (2020)
Horizontal transfer (HT) and evolution of transposable elements (TEs) has rarely been quantified on a large scale. Here, the authors screen 307 vertebrate genomes and infer 975 HT events (93% in ray-finned fishes); all TEs involved in HT evolve withi
Externí odkaz:
https://doaj.org/article/3ac0f4816382480194fbfeef29633641
Autor:
Hua-Hao Zhang, Qiu-Zhong Zhou, Ping-Lan Wang, Xiao-Min Xiong, Andrea Luchetti, Didier Raoult, Anthony Levasseur, Sebastien Santini, Chantal Abergel, Matthieu Legendre, Jean-Michel Drezen, Catherine Béliveau, Michel Cusson, Shen-Hua Jiang, Hai-Ou Bao, Cheng Sun, Thomas E. Bureau, Peng-Fei Cheng, Min-Jin Han, Ze Zhang, Xiao-Gu Zhang, Fang-Yin Dai
Publikováno v:
Mobile DNA, Vol 9, Iss 1, Pp 1-12 (2018)
Abstract Background Transposable elements (TEs) are common and often present with high copy numbers in cellular genomes. Unlike in cellular organisms, TEs were previously thought to be either rare or absent in viruses. Almost all reported TEs display
Externí odkaz:
https://doaj.org/article/1a4e70064be8419c8c02af3f72c95b31
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-10 (2020)
Nature Communications
Nature Communications, 2020, 11, pp.1362. ⟨10.1038/s41467-020-15149-4⟩
Nature Communications, Nature Publishing Group, 2020, 11, pp.1362. ⟨10.1038/s41467-020-15149-4⟩
Nature Communications
Nature Communications, 2020, 11, pp.1362. ⟨10.1038/s41467-020-15149-4⟩
Nature Communications, Nature Publishing Group, 2020, 11, pp.1362. ⟨10.1038/s41467-020-15149-4⟩
Horizontal transfer of transposable elements (HTT) is an important process shaping eukaryote genomes, yet very few studies have quantified this phenomenon on a large scale or have evaluated the selective constraints acting on transposable elements (T
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c2c001a8a6171c4ea1222081ae4f3299
http://link.springer.com/article/10.1038/s41467-020-15149-4
http://link.springer.com/article/10.1038/s41467-020-15149-4
Autor:
Min-Rui-Xuan Xu, Xiao-Min Xiong, Andrea Luchetti, Hua-Hao Zhang, Ping-Lan Wang, Xiao-Gu Zhang, Angelo Alberto Ruggieri
Publikováno v:
Genome Biology and Evolution
Although DNA transposons often generated internal deleted derivatives such as miniature inverted-repeat transposable elements, short internally deleted elements (SIDEs) derived from nonlong terminal-repeat retrotransposons are rare. Here, we found a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::458adc3ee84123c17cfc099f6db794c2
https://doi.org/10.1093/gbe/evz174
https://doi.org/10.1093/gbe/evz174
Publikováno v:
Genes & Genomics. 40:1041-1051
Although there are some documented examples on population dynamics of transposable elements (TEs) in model organisms, the evolutionary dynamics of TEs in domesticated species has not been systematically investigated. The objective of this study is to
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3cfc41c1a0f207d0d7330ebec9c9fc2e
https://doi.org/10.1007/s13258-018-0713-1
https://doi.org/10.1007/s13258-018-0713-1
Autor:
Ze Zhang, Min-Jin Han, Shen-Hua Jiang, Ping-Lan Wang, Xiao-Min Xiong, Qiu-Zhong Zhou, Jean-Michel Drezen, Xiao-Gu Zhang, Didier Raoult, Michel Cusson, Chantal Abergel, Cheng Sun, Matthieu Legendre, Anthony Levasseur, Thomas E. Bureau, Sébastien Santini, Andrea Luchetti, Catherine Béliveau, Fang-Yin Dai, Hua-Hao Zhang, Peng-Fei Cheng, Hai-Ou Bao
Publikováno v:
Mobile DNA, Vol 9, Iss 1, Pp 1-12 (2018)
Mobile DNA
Mobile DNA, 2018, 9, pp.19. ⟨10.1186/s13100-018-0125-4⟩
Mobile DNA, BioMed Central, 2018, 9, pp.19. ⟨10.1186/s13100-018-0125-4⟩
Mobile DNA
Mobile DNA, 2018, 9, pp.19. ⟨10.1186/s13100-018-0125-4⟩
Mobile DNA, BioMed Central, 2018, 9, pp.19. ⟨10.1186/s13100-018-0125-4⟩
Background Transposable elements (TEs) are common and often present with high copy numbers in cellular genomes. Unlike in cellular organisms, TEs were previously thought to be either rare or absent in viruses. Almost all reported TEs display only one
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b86402dce02ec7d6e1893418bbf12ab0
http://link.springer.com/article/10.1186/s13100-018-0125-4
http://link.springer.com/article/10.1186/s13100-018-0125-4
Publikováno v:
Genes & Genomics. 40:485-495
TC1/Mariner transposons belong to class II transposable elements (TEs) that use DNA-mediated "cut and paste" mechanism to transpose, and they have been identified in almost all organisms. Although silkworm (Bombyx mori) has a large amount of TC1/Mari
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e89d4798b0bd81bdf82e6098e050f1ac
https://doi.org/10.1007/s13258-018-0648-6
https://doi.org/10.1007/s13258-018-0648-6
Autor:
Cheng-Feng Nie, Xu Wen, Fangyin Dai, Min-Rui-Xuan Xu, Qing-Xiang Zeng, Xiao-Min Xiong, Ping-Lan Wang, Zhi-Guo Zhu, Le Wang, Zhen-Zhen Xie, Hua-Hao Zhang, Xiao-Gu Zhang
Publikováno v:
Molecular ecology resourcesREFERENCES. 20(4)
Ancherythroculter nigrocauda is a cyprinid fish endemic of the upper reaches of the Yangtze River in China, where it is an important aquaculture and commercial species. It is also a threatened species as a result of overfishing, dam construction and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6eb47e269f433c59179faac25c66fccd
https://pubmed.ncbi.nlm.nih.gov/32216061
https://pubmed.ncbi.nlm.nih.gov/32216061
Publikováno v:
Genome Biology and Evolution
We report a Danio rerio transposon named DrTRT, for D. rerio Transposon Related to Tc1. The complete sequence of the DrTRT transposon is 1,563 base pairs (bp) in length, and its transposase putatively encodes a 338-amino acid protein that harbors a D
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1d7946cd1346c5865a77be6a8bec615f
https://doi.org/10.1093/gbe/evw213
https://doi.org/10.1093/gbe/evw213