Zobrazeno 1 - 10
of 82
pro vyhledávání: '"Hotopp JC"'
Publikováno v:
Microbiology Resource Announcements
Here, we describe the draft genome sequences of three strains of Citrobacter isolated from feces of preterm neonates with suspected sepsis. Strains P106E PI and P079F I were Citrobacter freundii. Strain P080C CL represents the first draft genome sequ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::123ffc41a05b5b29d268ac678cd39f7f
https://doi.org/10.1128/mra.00494-19
https://doi.org/10.1128/mra.00494-19
Autor:
Matthew Chung, Lisa Sadzewicz, Dunning Hotopp Jc, Ricky S. Adkins, Luke J. Tallon, David A. Rasko, Anup Mahurkar, Amol C. Shetty, Claire M. Fraser
MotivationThe major algorithms for quantifying transcriptomics data for differential gene expression analysis were designed for analyzing data from human or human-like genomes, specifically those with single gene transcripts and distinct transcriptio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5aa7ab447986c2a490a7ea291df01b4e
Autor:
Rino Rappuoli, Alessandro Muzzi, Claudio Donati, Marco R. Oggioni, Timothy J. Mitchell, Garth D. Ehrlich, Fen Z. Hu, Antonello Covacci, Stephen D. Bentley, E. Richard Moxon, Hervé Tettelin, Morgens Kilian, David R. Riley, Samuel V. Angiuoli, Julie C. Dunning Hotopp, Vega Masignani, Nicholas J. Croucher, N. Luisa Hiller
Publikováno v:
Genome Biology
Genome Biology; Vol 11
Donati, C, Hiller, N L, Tettelin, H, Muzzi, A, Croucher, N J, Angiuoli, S V, Oggioni, M, Dunning Hotopp, J C, Hu, F Z, Riley, D R, Covacci, A, Mitchell, T J, Bentley, S D, Kilian, M, Ehrlich, G D, Rappuoli, R, Moxon, E R & Masignani, V 2010, ' Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species ', Genome Biology, vol. 11, no. 10, pp. R107 . https://doi.org/10.1186/gb-2010-11-10-r107
Genome Biology; Vol 11
Donati, C, Hiller, N L, Tettelin, H, Muzzi, A, Croucher, N J, Angiuoli, S V, Oggioni, M, Dunning Hotopp, J C, Hu, F Z, Riley, D R, Covacci, A, Mitchell, T J, Bentley, S D, Kilian, M, Ehrlich, G D, Rappuoli, R, Moxon, E R & Masignani, V 2010, ' Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species ', Genome Biology, vol. 11, no. 10, pp. R107 . https://doi.org/10.1186/gb-2010-11-10-r107
BACKGROUND: Streptococcus pneumoniae is one of the most important causes of microbial diseases in humans. The genomes of 44 diverse strains of S. pneumoniae were analyzed and compared with strains of non-pathogenic streptococci of the Mitis group. RE
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d495d2b09d443cf0dd604bf496868c2c
Autor:
Mattick JSA; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA., Bromley RE; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA., Watson KJ; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA., Adkins RS; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA., Holt CI; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA., Lebov JF; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA., Sparklin BC; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA., Tyson TS; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA., Rasko DA; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Center for Pathogen Research, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbial Pathogenesis, University of Maryland School of Dentistry, Baltimore, Maryland, USA., Dunning Hotopp JC; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA.; Greenebaum Cancer Center, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Publikováno v:
MBio [mBio] 2024 Oct 16; Vol. 15 (10), pp. e0235924. Date of Electronic Publication: 2024 Sep 17.
Autor:
Holt CI; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America., Dunning Hotopp JC; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.; Greenebaum Cancer Center, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Publikováno v:
PLoS neglected tropical diseases [PLoS Negl Trop Dis] 2024 Sep 26; Vol. 18 (9), pp. e0012511. Date of Electronic Publication: 2024 Sep 26 (Print Publication: 2024).
Autor:
Cantin LJ; Biochemistry and Microbiology Division, New England BioLabs, Ipswich, MA, United States., Dunning Hotopp JC; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, United States., Foster JM; Biochemistry and Microbiology Division, New England BioLabs, Ipswich, MA, United States.
Publikováno v:
Frontiers in microbiology [Front Microbiol] 2024 Feb 15; Vol. 15, pp. 1352378. Date of Electronic Publication: 2024 Feb 15 (Print Publication: 2024).
Autor:
Watson KJ; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA., Bromley RE; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA., Sparklin BC; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA., Gasser MT; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA., Bhattacharya T; Department of Biology, Indiana University, Bloomington, IN, USA., Lebov JF; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA., Tyson T; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA., Dai N; New England Biolabs, Ipswich, MA, USA., Teigen LE; Department of Biology, University of Wisconsin Oshkosh, Oshkosh, WI, USA., Graf KT; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA., Foster JM; New England Biolabs, Ipswich, MA, USA., Michalski M; Department of Biology, University of Wisconsin Oshkosh, Oshkosh, WI, USA., Bruno VM; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA., Lindsey AR; Department of Biology, Indiana University, Bloomington, IN, USA., Corrêa IR Jr; New England Biolabs, Ipswich, MA, USA., Hardy RW; Department of Biology, Indiana University, Bloomington, IN, USA., Newton IL; Department of Biology, Indiana University, Bloomington, IN, USA., Dunning Hotopp JC; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA jdhotopp@som.umaryland.edu.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA.; Greenebaum Cancer Center, University of Maryland School of Medicine, Baltimore, MD, USA.
Publikováno v:
Life science alliance [Life Sci Alliance] 2023 Nov 29; Vol. 7 (2). Date of Electronic Publication: 2023 Nov 29 (Print Publication: 2024).
Autor:
Tvedte ES; Institute for Genome Sciences, University of Maryland School of Medicine, Health Sciences Facility III #2106, 670 West Baltimore Street, Baltimore, MD 21201, USA., Gasser M; Institute for Genome Sciences, University of Maryland School of Medicine, Health Sciences Facility III #2106, 670 West Baltimore Street, Baltimore, MD 21201, USA., Zhao X; Institute for Genome Sciences, University of Maryland School of Medicine, Health Sciences Facility III #2106, 670 West Baltimore Street, Baltimore, MD 21201, USA., Tallon LJ; Institute for Genome Sciences, University of Maryland School of Medicine, Health Sciences Facility III #2106, 670 West Baltimore Street, Baltimore, MD 21201, USA., Sadzewicz L; Institute for Genome Sciences, University of Maryland School of Medicine, Health Sciences Facility III #2106, 670 West Baltimore Street, Baltimore, MD 21201, USA., Bromley RE; Institute for Genome Sciences, University of Maryland School of Medicine, Health Sciences Facility III #2106, 670 West Baltimore Street, Baltimore, MD 21201, USA., Chung M; Institute for Genome Sciences, University of Maryland School of Medicine, Health Sciences Facility III #2106, 670 West Baltimore Street, Baltimore, MD 21201, USA., Mattick J; Institute for Genome Sciences, University of Maryland School of Medicine, Health Sciences Facility III #2106, 670 West Baltimore Street, Baltimore, MD 21201, USA., Sparklin BC; Institute for Genome Sciences, University of Maryland School of Medicine, Health Sciences Facility III #2106, 670 West Baltimore Street, Baltimore, MD 21201, USA., Dunning Hotopp JC; Institute for Genome Sciences, University of Maryland School of Medicine, Health Sciences Facility III #2106, 670 West Baltimore Street, Baltimore, MD 21201, USA; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD 21201, USA; Greenebaum Cancer Center, University of Maryland School of Medicine, Baltimore, MD 21201, USA. Electronic address: jdhotopp@som.umaryland.edu.
Publikováno v:
Current biology : CB [Curr Biol] 2022 Jun 20; Vol. 32 (12), pp. 2786-2795.e5. Date of Electronic Publication: 2022 Jun 06.
Autor:
Mattick J; Institute for Genome Science, University of Maryland, Baltimore, Maryland, United States of America., Libro S; New England Biolabs, Ipswich, Massachusetts, United States of America., Bromley R; Institute for Genome Science, University of Maryland, Baltimore, Maryland, United States of America., Chaicumpa W; Department of Parasitology, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand., Chung M; Institute for Genome Science, University of Maryland, Baltimore, Maryland, United States of America., Cook D; Centre for Neglected Tropical Diseases, Department of Tropical Disease Biology, Liverpool School of Tropical Medicine, Liverpool, United Kingdom., Khan MB; Department of Parasitology, Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia., Kumar N; Institute for Genome Science, University of Maryland, Baltimore, Maryland, United States of America., Lau YL; Department of Parasitology, Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia., Misra-Bhattacharya S; Division of Parasitology, CSIR-Central Drug Research Institute, Lucknow, India., Rao R; Division of Infectious Diseases, Washington University School of Medicine, St Louis, Missouri, United States of America., Sadzewicz L; Institute for Genome Science, University of Maryland, Baltimore, Maryland, United States of America., Saeung A; Center of Insect Vector Study, Department of Parasitology, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand., Shahab M; Division of Parasitology, CSIR-Central Drug Research Institute, Lucknow, India., Sparklin BC; Institute for Genome Science, University of Maryland, Baltimore, Maryland, United States of America., Steven A; Centre for Neglected Tropical Diseases, Department of Tropical Disease Biology, Liverpool School of Tropical Medicine, Liverpool, United Kingdom., Turner JD; Centre for Neglected Tropical Diseases, Department of Tropical Disease Biology, Liverpool School of Tropical Medicine, Liverpool, United Kingdom., Tallon LJ; Institute for Genome Science, University of Maryland, Baltimore, Maryland, United States of America., Taylor MJ; Centre for Neglected Tropical Diseases, Department of Tropical Disease Biology, Liverpool School of Tropical Medicine, Liverpool, United Kingdom., Moorhead AR; Department of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, Georgia, United States of America., Michalski M; University of Wisconsin Oshkosh, Oshkosh, Wisconsin, United States of America., Foster JM; New England Biolabs, Ipswich, Massachusetts, United States of America., Dunning Hotopp JC; Institute for Genome Science, University of Maryland, Baltimore, Maryland, United States of America.; Department of Microbiology and Immunology, University of Maryland, Baltimore, Maryland, United States of America.; Greenebaum Cancer Center, University of Maryland, Baltimore, Maryland, United States of America.
Publikováno v:
PLoS neglected tropical diseases [PLoS Negl Trop Dis] 2021 Oct 27; Vol. 15 (10), pp. e0009838. Date of Electronic Publication: 2021 Oct 27 (Print Publication: 2021).
Autor:
Tvedte ES; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA. etvedte@som.umaryland.edu., Michalski J; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Cheng S; Department of Medicine, University of Pittsburgh, Pittsburgh, PA, 15261, USA., Patkus RS; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Tallon LJ; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Sadzewicz L; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Bruno VM; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Silva JC; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Rasko DA; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA., Dunning Hotopp JC; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA. jdhotopp@som.umaryland.edu.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA. jdhotopp@som.umaryland.edu.; Greenebaum Cancer Center, University of Maryland School of Medicine, Baltimore, MD, 21201, USA. jdhotopp@som.umaryland.edu.
Publikováno v:
Scientific reports [Sci Rep] 2021 Aug 05; Vol. 11 (1), pp. 15925. Date of Electronic Publication: 2021 Aug 05.