Single-molecule visualization of fast polymerase turnover in the bacterial replisome.

Autor: Lewis JS; Centre for Medical and Molecular Bioscience, University of Wollongong, Wollongong, Australia.; Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong, Australia., Spenkelink LM; Centre for Medical and Molecular Bioscience, University of Wollongong, Wollongong, Australia.; Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong, Australia.; Zernike Institute for Advanced Materials, University of Groningen, Groningen, The Netherlands., Jergic S; Centre for Medical and Molecular Bioscience, University of Wollongong, Wollongong, Australia.; Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong, Australia., Wood EA; Department of Biochemistry, University of Wisconsin-Madison, Madison, United States., Monachino E; Centre for Medical and Molecular Bioscience, University of Wollongong, Wollongong, Australia.; Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong, Australia.; Zernike Institute for Advanced Materials, University of Groningen, Groningen, The Netherlands., Horan NP; Centre for Medical and Molecular Bioscience, University of Wollongong, Wollongong, Australia.; Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong, Australia., Duderstadt KE; Zernike Institute for Advanced Materials, University of Groningen, Groningen, The Netherlands.; Max Planck Institute of Biochemistry, Martinsried, Germany.; Physik Department, Technishche Universität München, Garching, Germany., Cox MM; Department of Biochemistry, University of Wisconsin-Madison, Madison, United States., Robinson A; Centre for Medical and Molecular Bioscience, University of Wollongong, Wollongong, Australia.; Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong, Australia., Dixon NE; Centre for Medical and Molecular Bioscience, University of Wollongong, Wollongong, Australia.; Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong, Australia., van Oijen AM; Centre for Medical and Molecular Bioscience, University of Wollongong, Wollongong, Australia.; Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong, Australia.

Publikováno v: ELife [Elife] 2017 Apr 22; Vol. 6. Date of Electronic Publication: 2017 Apr 22.

Proofreading exonuclease on a tether: the complex between the E. coli DNA polymerase III subunits α, epsilon, θ and β reveals a highly flexible arrangement of the proofreading domain.

Autor: Ozawa K; School of Chemistry, University of Wollongong, Northfields Avenue, Wollongong, NSW 2522, Australia., Horan NP, Robinson A, Yagi H, Hill FR, Jergic S, Xu ZQ, Loscha KV, Li N, Tehei M, Oakley AJ, Otting G, Huber T, Dixon NE

Publikováno v: Nucleic acids research [Nucleic Acids Res] 2013 May 01; Vol. 41 (10), pp. 5354-67. Date of Electronic Publication: 2013 Apr 10.

Clues to transcription/replication collision-induced DNA damage: it was RNAP, in the chromosome, with the fork.

Autor: Cooke MB; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA., Herman C; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.; Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.; Dan L. Duncan Cancer Center, Baylor College of Medicine, Houston, TX, USA., Sivaramakrishnan P; Center for Computational and Genomic Medicine, Children's Hospital of Philadelphia, PA, USA.

Publikováno v: FEBS letters [FEBS Lett] 2024 Nov 24. Date of Electronic Publication: 2024 Nov 24.

ColiCoords: A Python package for the analysis of bacterial fluorescence microscopy data.

Autor: Smit, Jochem H.¹ jhsmit@gmail.com, Li, Yichen¹, Warszawik, Eliza M.², Herrmann, Andreas^2,3,4, Cordes, Thorben^1,5 cordes@bio.lmu.de

Publikováno v: PLoS ONE. 6/19/2019, Vol. 14 Issue 6, p1-18. 18p.

What is all this fuss about Tus? Comparison of recent findings from biophysical and biochemical experiments.

Autor: Berghuis, Bojk A.¹ (AUTHOR), Raducanu, Vlad-Stefan² (AUTHOR), Elshenawy, Mohamed M.² (AUTHOR), Jergic, Slobodan³ (AUTHOR), Depken, Martin¹ (AUTHOR) s.m.depken@tudelft.nl, Dixon, Nicholas E.³ (AUTHOR) nickd@uow.edu.au, Hamdan, Samir M.² (AUTHOR) samir.hamdan@kaust.edu.sa, Dekker, Nynke H.¹ (AUTHOR) n.h.dekker@tudelft.nl

Publikováno v: Critical Reviews in Biochemistry & Molecular Biology. 2018, Vol. 53 Issue 1, p49-63. 15p.