Zobrazeno 1 - 8
of 8
pro vyhledávání: '"Holger Karas"'
Autor:
V. Matys, Holger Karas, Ingmar Reuter, Reinhard Hehl, Edgar Wingender, Ines Liebich, M. Prüß, Xin Chen, Frank Schacherer, T. Meinhardt
Publikováno v:
Scopus-Elsevier
TRANSFAC is a database on transcription factors, their genomic binding sites and DNA-binding profiles (http://transfac.gbf.de/TRANSFAC/ ). Its content has been enhanced, in particular by information about training sequences used for the construction
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5f7876cfc472f32afc01ecb6b5834390
https://doi.org/10.1093/nar/28.1.316
https://doi.org/10.1093/nar/28.1.316
Publikováno v:
Nucleic Acids Research. 24:238-241
TRANSFAC is a database about eukaryotic transcription regulating DNA sequence elements and the transcription factors binding to and acting through them. This report summarizes the present status of this database and accompanying retrieval tools.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::995b874aab6ed953ef08edd5dd01ee62
https://doi.org/10.1093/nar/24.1.238
https://doi.org/10.1093/nar/24.1.238
Publikováno v:
it - Information Technology. 46:48-50
Zusammenfassung Bioinformatik war einer der ganz großen Trends der letzten Jahre und ist in veränderter Form immer noch ein wichtiger Bereich. Allerdings haben sich die Anforderungen gewandelt, waren früher "self-made" Informatiker für die meiste
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3c8bdac5486f9ef44deb7e7da783e6b5
https://doi.org/10.1524/itit.46.1.48.26500
https://doi.org/10.1524/itit.46.1.48.26500
Publikováno v:
Nucleic Acids Research. 23:4878-4884
The identification of potential regulatory motifs in new sequence data is increasingly important for experimental design. Those motifs are commonly located by matches to IUPAC strings derived from consensus sequences. Although this method is simple a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::758a615ca0e1ef2096860f77a661ecd2
https://doi.org/10.1093/nar/23.23.4878
https://doi.org/10.1093/nar/23.23.4878
Autor:
Holger Karas, Alexander E. Kel, O. V. Kel, T. Meinhardt, T. Heinemeyer, Ingmar Reuter, Ines Liebich, Xin Chen, Frank Schacherer, Edgar Wingender
TRANSFAC is a database on transcription factors, their genomic binding sites and DNA-binding profiles. In addition to being updated and extended by new features, it has been complemented now by a series of additional database modules. Among them, mod
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c19aaf4dfc5ad0a614de83ec43b4f300
https://europepmc.org/articles/PMC148171/
https://europepmc.org/articles/PMC148171/
Autor:
P. Dietze, O. V. Kel, Holger Karas, A. G. Romaschenko, Edgar Wingender, Alexander E. Kel, T. Heinemeyer, Nikolay A. Kolchanov, Rainer Knüppel
Three databases that provide data on transcriptional regulation are described. TRANSFAC is a database on transcription factors and their DNA binding sites. TRRD (Transcription Regulatory Region Database) collects information about complete regulatory
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5a78ad08f9a08d20d189d2a38f4b64f2
https://europepmc.org/articles/PMC146363/
https://europepmc.org/articles/PMC146363/
Publikováno v:
Europe PubMed Central
Motivation: Analysis of unannotated genomic sequences for regulatory regions depends on a reliable recognition of individual cis-acting elements. Since some of them have a very low conserved sequence pattern, additional criteria are required. Results
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8e3bef8fbc5f58a192fb7cd15970c6da
https://pubmed.ncbi.nlm.nih.gov/8996793
https://pubmed.ncbi.nlm.nih.gov/8996793
Autor:
O. V. Vishnevsky, Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Holger Karas, I. V. Ischenko, A. E. Kel, O. V. Kel, Edgar Wingender, Heinz Sklenar
Publikováno v:
Bioinformatics ISBN: 9783540633709
German Conference on Bioinformatics-Selected Papers
German Conference on Bioinformatics-Selected Papers
Two new databases have been developed to provide the comprehensive research on mechanisms controlling eukaryotic gene expression on the transcription level: TRRD (Transcription Regulatory Region Database) for accumulation of data about structural and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1749b897627da7b277834327e4bcdcbb
https://doi.org/10.1007/bfb0033208
https://doi.org/10.1007/bfb0033208