Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Hisae Karimata"'
Publikováno v:
Journal of the American Chemical Society. 131:16881-16888
Short RNA sequences exhibiting the activity of a target RNA cleavage are promising for cellular gene regulation and biosensor research, but the reaction media different from an aqueous solution may cause unanticipated molecular interactions and prope
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c473892ee26713c3cbb62ae06c5474ab
https://doi.org/10.1021/ja9066628
https://doi.org/10.1021/ja9066628
Publikováno v:
Nucleosides, Nucleotides and Nucleic Acids. 26:589-595
Although water is an integral part of DNA structures, the effects of water molecules on various DNA structures which are formed by not only Watson-Crick but also Hoogsteen base pairs are still unclear. Here, we studied quantitatively the effects of m
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0d3d0cb23c60a4126f175bad278a5aee
https://doi.org/10.1080/15257770701490282
https://doi.org/10.1080/15257770701490282
Publikováno v:
Bulletin of the Chemical Society of Japan. 80:1987-1994
Although the thermodynamic stability of ordered DNA is known to be affected by interactions with cations and water molecules, there is scarce quantitative information about the behavior of DNA unde...
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::159bf1e01167a4694602210fe3ea7437
https://doi.org/10.1246/bcsj.80.1987
https://doi.org/10.1246/bcsj.80.1987
Publikováno v:
Angewandte Chemie International Edition. 44:3740-3744
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d2d5330ae6d6bde3a41e0e2d7780440c
https://doi.org/10.1002/anie.200462667
https://doi.org/10.1002/anie.200462667
Publikováno v:
Biochemistry. 44:7125-7130
DNA is a promising material for the construction of a biosensor or bioindicator because its structure is sensitive to the binding of cofactors. In the current studies, we found that a combination of two DNA oligonucleotides, 5'-TCTTTCTCTTCT-3' and 5'
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fa1102fb936c70c3c08c5d5866a926af
https://doi.org/10.1021/bi0476782
https://doi.org/10.1021/bi0476782
Publikováno v:
Nucleic acids symposium series (2004). (52)
Although metal ion is essential for the DNA and RNA folding, there are a limited number of reports describing the influence of molecular environments on the metal ion binding. Here, we investigated the binding properties of Mg(2+) and Na(+) toward th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4852bbbf61e37b634a0878d0fb8df979
https://pubmed.ncbi.nlm.nih.gov/18776482
https://pubmed.ncbi.nlm.nih.gov/18776482
Autor:
Lei Wu, Hisae Karimata, Hiroshi Sakai, Toshimasa Kirihata, Satoshi Fujii, Naoki Sugimoto, Yuichi Sato, Hirohito Oka, Masayuki Kuwahara, Hiroaki Sawai, Shu-ichi Nakano
Publikováno v:
Molecular bioSystems. 4(6)
Water-soluble neutral cosolutes can be used to quantify biomolecular properties in the particular molecular environment occurring in a cell. We studied the conformation and the thermal stability of DNA and RNA structures in the presence of PEG [poly(
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e931be4485d6787a347baa973d90c9c0
https://pubmed.ncbi.nlm.nih.gov/18493656
https://pubmed.ncbi.nlm.nih.gov/18493656
Publikováno v:
Scopus-Elsevier
We investigated molecular crowding effects on the thermodynamic stability of Hoogsteen and Watson-Crick base pairs in an intramolecular duplex and triplex. The melting temperature (Tm) of Hoogsteen base pair formations in the triplex and the duplex i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::818d2390bf2587f885e4a5fd8997e72c
https://pubmed.ncbi.nlm.nih.gov/18029639
https://pubmed.ncbi.nlm.nih.gov/18029639
Publikováno v:
Journal of the American Chemical Society. 129(18)
Development of a guanine nanowire (G-wire) that is controllable and can be switched by external signals is important for the creation of molecular electronic technologies. Here, we constructed a G-wire in which the thymines of the main chain of d(G4T
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f4ebf70c6a57c6052c9e12791d7dd230
https://pubmed.ncbi.nlm.nih.gov/17439212
https://pubmed.ncbi.nlm.nih.gov/17439212
Publikováno v:
Scopus-Elsevier
We designed and synthesized an artificial DNA that undergoes a structural transition induced by metal ions. A 2, 2'-bipyridine unit was incorporated into the main chain of d(G4T4G4) instead of thymine. Structural analyses of the artificial DNA with a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::00a4d25e05f25d0d19393bcaf9280651
https://pubmed.ncbi.nlm.nih.gov/17150624
https://pubmed.ncbi.nlm.nih.gov/17150624