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pro vyhledávání: '"Hila Benjamin-Rodrig"'
Autor:
Ron Ophir, Hila Benjamin-Rodrig, Vered Chalifa-Caspi, Orit Shmueli, Eytan Domany, Doron Lancet, Shirley Horn-Saban, Marilyn Safran, Michael Shmoish
Publikováno v:
Comptes Rendus Biologies. 326:1067-1072
A novel data set, GeneNote (Gene Normal Tissue Expression), was produced to portray complete gene expression profiles in healthy human tissues using the Affymetrix GeneChip HG-U95 set, which includes 62 839 probe-sets. The hybridization intensities o
Autor:
Ron Ophir, Pavel Kats, Marilyn Safran, Itai Yanai, Naomi Rosen, Hila Benjamin-Rodrig, Doron Lancet, Vered Chalifa-Caspi, Michael Shmoish, Orit Shmueli
Publikováno v:
Briefings in Bioinformatics. 4:349-360
The interpretation of microarray expression results often includes extensive efforts to identify and annotate the gene representatives immobilised on the arrays. In this paper we describe the usage of our automatic GeneAnnot system, which links betwe
Autor:
Ron Ophir, V. Chalifa-Casp, Orit Shmueli, Doron Lancet, Michael Shmoish, Naomi Rosen, Hila Benjamin-Rodrig, Marilyn Safran, Itai Yanai
Publikováno v:
Computational Systems Bioinformatics. CSB2003. Proceedings of the 2003 IEEE Bioinformatics Conference. CSB2003.
The popular GeneCards/spl trade/ integrated database of human genes, genomic maps, proteins and diseases has recently spawned three related functional genomics efforts. As sequence data rapidly accumulates, the bottleneck in biology shifts from data
GeneAnnot: comprehensive two-way linking between oligonucleotide array probesets and GeneCards genes
Autor:
Doron Lancet, Orit Shmueli, Tsippi Iny Stein, Vered Chalifa-Caspi, Maxim Shklar, Itai Yanai, Michael Shmoish, Marilyn Safran, Hila Benjamin-Rodrig, Ron Ophir, Naomi Rosen
Publikováno v:
Bioinformatics (Oxford, England). 20(9)
Motivation: High density oligonucleotide arrays are usually annotated in a one-to-one fashion, with each probeset assigned to one gene. However, in reality, subsets of oligonucleotides in a probeset may match sequences within more than one gene, pote