Zobrazeno 1 - 10
of 609
pro vyhledávání: '"Hiendleder,"'
Autor:
Consuelo Amor S. Estrella, Kathryn L. Gatford, Ruidong Xiang, Ali Javadmanesh, Mani Ghanipoor-Samami, Greg S. Nattrass, Entesar Shuaib, Milton M. McAllister, Ian Beckman, Dana A. Thomsen, Vicki L. Clifton, Julie A. Owens, Claire T. Roberts, Stefan Hiendleder, Karen L. Kind
Publikováno v:
Frontiers in Endocrinology, Vol 14 (2024)
IntroductionSex differences in prenatal growth may contribute to sex-dependent programming effects on postnatal phenotype. MethodsWe integrated for the first time phenotypic, histomorphological, clinico-chemical, endocrine and gene expression analyse
Externí odkaz:
https://doaj.org/article/1ba89041b5af490ead28df8a7c01ae87
Publikováno v:
Frontiers in Genetics, Vol 14 (2023)
Introduction: MicroRNAs (miRNAs) play a crucial role in regulating gene expression during key developmental processes, including fetal development. Brahman (Bos taurus indicus) and Angus (Bos taurus taurus) cattle breeds represent two major cattle su
Externí odkaz:
https://doaj.org/article/b79cc8ce35bb4c86b65ee17c48ba58eb
Autor:
Yan Ren, Elizabeth Tseng, Timothy P. L. Smith, Stefan Hiendleder, John L. Williams, Wai Yee Low
Publikováno v:
BMC Genomics, Vol 24, Iss 1, Pp 1-15 (2023)
Abstract The Iso-Seq method of full-length cDNA sequencing is suitable to quantify differentially expressed genes (DEGs), transcripts (DETs) and transcript usage (DTU). However, the higher cost of Iso-Seq relative to RNA-seq has limited the compariso
Externí odkaz:
https://doaj.org/article/8d810fdf2970432387c90b775df4176e
Autor:
Wai Yee Low, Benjamin D. Rosen, Yan Ren, Derek M. Bickhart, Thu-Hien To, Fergal J. Martin, Konstantinos Billis, Tad S. Sonstegard, Shawn T. Sullivan, Stefan Hiendleder, John L. Williams, Michael P. Heaton, Timothy P. L. Smith
Publikováno v:
BMC Genomics, Vol 23, Iss 1, Pp 1-15 (2022)
Abstract Background The gaur (Bos gaurus) is the largest extant wild bovine species, native to South and Southeast Asia, with unique traits, and is listed as vulnerable by the International Union for Conservation of Nature (IUCN). Results We report t
Externí odkaz:
https://doaj.org/article/84c7933feeb842ee95309f9a58508ce6
Akademický článek
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Autor:
Ruijie Liu, Rick Tearle, Wai Yee Low, Tong Chen, Dana Thomsen, Timothy P. L. Smith, Stefan Hiendleder, John L. Williams
Publikováno v:
BMC Genomics, Vol 22, Iss 1, Pp 1-10 (2021)
Abstract Background There are two genetically distinct subspecies of cattle, Bos taurus taurus and Bos taurus indicus, which arose from independent domestication events. The two types of cattle show substantial phenotypic differences, some of which e
Externí odkaz:
https://doaj.org/article/2997b310cf0142fdab75141fcee61531
Autor:
Zev N. Kronenberg, Arang Rhie, Sergey Koren, Gregory T. Concepcion, Paul Peluso, Katherine M. Munson, David Porubsky, Kristen Kuhn, Kathryn A. Mueller, Wai Yee Low, Stefan Hiendleder, Olivier Fedrigo, Ivan Liachko, Richard J. Hall, Adam M. Phillippy, Evan E. Eichler, John L. Williams, Timothy P. L. Smith, Erich D. Jarvis, Shawn T. Sullivan, Sarah B. Kingan
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-10 (2021)
Methods to produce haplotype-resolved genome assemblies often rely on access to family trios. The authors present FALCON-Phase, a tool that combines ultra-long range Hi-C chromatin interaction data with a long read de novo assembly to extend haplotyp
Externí odkaz:
https://doaj.org/article/36f8c0b7e92d40fdb0d367dee6cfc462
Akademický článek
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Autor:
Wai Yee Low, Rick Tearle, Ruijie Liu, Sergey Koren, Arang Rhie, Derek M. Bickhart, Benjamin D. Rosen, Zev N. Kronenberg, Sarah B. Kingan, Elizabeth Tseng, Françoise Thibaud-Nissen, Fergal J. Martin, Konstantinos Billis, Jay Ghurye, Alex R. Hastie, Joyce Lee, Andy W. C. Pang, Michael P. Heaton, Adam M. Phillippy, Stefan Hiendleder, Timothy P. L. Smith, John L. Williams
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-14 (2020)
Taurine and indicine cattle have different desirable traits making them better adapted to different climates across the world. Here, Low et al. describe a pipeline to produce haplotype-resolved, chromosome-level genomes of Angus and Brahman cattle br
Externí odkaz:
https://doaj.org/article/749bdf7435784bab8b04ef53bcc16d5a
Autor:
Ruijie Liu, Wai Yee Low, Rick Tearle, Sergey Koren, Jay Ghurye, Arang Rhie, Adam M. Phillippy, Benjamin D. Rosen, Derek M. Bickhart, Timothy P. L. Smith, Stefan Hiendleder, John L. Williams
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-11 (2019)
Abstract Background Mammalian X chromosomes are mainly euchromatic with a similar size and structure among species whereas Y chromosomes are smaller, have undergone substantial evolutionary changes and accumulated male specific genes and genes involv
Externí odkaz:
https://doaj.org/article/93ad029cf564497db7913c1bf1d682e5