Výsledky vyhledávání - "Hidehisa, Yoshimura"

CyanoBase and RhizoBase: databases of manually curated annotations for cyanobacterial and rhizobial genomes

Autor: Yasukazu Nakamura, Satoshi Tabata, Sumiko Yamamoto, Toshiaki Katayama, Takakazu Kaneko, Yuka Yanaka, Hidehisa Yoshimura, Takatomo Fujisawa, Shinobu Okamoto, Hiroko Maita, Hiromi Kajiya-Kanegae, Mitsuteru Nakao, Chiyoko Yano

Publikováno v: Nucleic Acids Research

To understand newly sequenced genomes of closely related species, comprehensively curated reference genome databases are becoming increasingly important. We have extended CyanoBase (http://genome.microbedb.jp/cyanobase), a genome database for cyanoba

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d14b692a357aaae3ff0efefa9e6c9ffb
https://doi.org/10.1093/nar/gkt1145

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Cell Surface-Associated Proteins in the Filamentous Cyanobacterium Anabaena sp. strain PCC 7120

Autor: Masayuki Ohomori, Hidehisa Yoshimura, Masahiko Ikeuchi

Publikováno v: Microbes and Environments. 27:538-543

The cell surface senses environmental changes first and transfers signals into the cell. To understand the response to environmental changes, it is necessary to analyze cell surface components, particularly cell surface-associated proteins. We theref

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::b247e2a54c5b4862571a3756752b465b
https://doi.org/10.1264/jsme2.me12091

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The role of extracellular polysaccharides produced by the terrestrial cyanobacterium Nostoc sp. strain HK-01 in NaCl tolerance

Autor: Masayuki Ohmori, Toshihisa Kotake, Yoichi Tsumuraya, Masahiko Ikeuchi, Hidehisa Yoshimura, Tsutomu Aohara

Publikováno v: Journal of Applied Phycology. 24:237-243

The terrestrial cyanobacterium Nostoc sp. HK-01 was more tolerant to NaCl stress than the aquatic cyanobacterium Anabaena sp. PCC 7120 (also called Nostoc sp. PCC 7120) which is similar to Nostoc sp. HK-01 in phylogeny. We determined the amount of ex

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::bded70ca95cf5781b2aa8ec390368804
https://doi.org/10.1007/s10811-011-9672-5

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CccS and CccP are Involved in Construction of Cell Surface Components in the Cyanobacterium Synechocystis sp. strain PCC 6803

Autor: Masahiko Ikeuchi, Hidehisa Yoshimura, Masayuki Ohmori, Shigeki Ehira, Yasuko Kaneko, Shizue Yoshihara

Publikováno v: Plant and Cell Physiology. 51:1163-1172

We have previously identified two target genes (slr1667 and slr1668) for transcriptional regulation by a cAMP receptor protein, SYCRP1, in a cAMP-dependent manner. For this study we investigated the localizations of products of slr1667 and slr1668 (d

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8d5397839b0c592ca4d018f03b3e2d20
https://doi.org/10.1093/pcp/pcq081

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ΔG-based prediction and experimental confirmation of SYCRP1-binding sites on the Synechocystis genome

Autor: Akinori Sarai, Katsumi Omagari, Masayuki Ohmori, Hidehisa Yoshimura, Mitunori Takano, Takayuki Suzuki

Publikováno v: FEBS Journal. 275:4786-4795

DNA-binding sites for SYCRP1, which is a regulatory protein of the cyanobacterium Synechocystissp. PCC6803, were predicted for the whole genome sequence by estimating changes in the binding free energy () for SYCRP1 for those sites. The values were c

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::7a645d9756e54679db34fa04d629944f
https://doi.org/10.1111/j.1742-4658.2008.06618.x

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Up-regulated Gene Expression during Dehydration in a Terrestrial Cyanobacterium, Nostoc sp. Strain HK-01

Autor: Hidehisa Yoshimura, Masahiko Ikeuchi, Masayuki Ohmori

Publikováno v: Microbes and Environments. 21:129-133

Genes expressed more intensively during dehydration were screened in the terrestrial cyanobacterium Nostoc sp. HK-01, which is phylogenetically very similar to the aquatic Anabaena sp. PCC 7120. A DNA microarray for Anabaena was used to determine the

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::de398010c61c01cb9ef5d5ed89482ffe
https://doi.org/10.1264/jsme2.21.129

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Anti-oxidative Stress System in Cyanobacteria

Autor: Ken Motohashi, Masayuki Ohmori, Akiko Nozaki, Toru Hisabori, Hidehisa Yoshimura, Kazuhito Inoue, Naomi Hosoya-Matsuda

Publikováno v: Journal of Biological Chemistry. 280:840-846

Two antioxidant proteins, SLL1621 and SLR1198, were captured in the cyanobacteria Synechocystis sp. PCC 6803 using thioredoxin affinity chromatography, which was first applied to the survey of thioredoxin target proteins in chloroplasts (Motohashi, K

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::e7abe61cd1fc597c95f5c77baa5b2fd3
https://doi.org/10.1074/jbc.m411493200

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Systematic single base-pair substitution analysis of DNA binding by the cAMP receptor protein in cyanobacteriumSynechocystissp. PCC 6803

Autor: Katsumi Omagari, Masayuki Ohmori, Akinori Sarai, Mitsunori Takano, Hidehisa Yoshimura, Dongyun Hao, Akira Suyama

Publikováno v: FEBS Letters. 563:55-58

The cAMP receptor protein SYCRP1 in cyanobacterium Synechocystis sp. PCC 6803 is a regulatory protein that binds to the consensus DNA sequence (5′-AAATGTGATCTAGATCACATTT-3′) for the cAMP receptor protein CRP in Escherichia coli. Here we examined

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::09a5b262b3cb7e05d08563abe2a6873a
https://doi.org/10.1016/s0014-5793(04)00248-0

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Use of segment-based microarray in the analysis of global gene expression in response to various environmental stresses in the cyanobacterium Anabaena sp. PCC 7120

Autor: Hidehisa Yoshimura, C. Peter Wolk, Takakazu Kaneko, Naoki Sato, Takatomo Fujisawa, Shinobu Okamoto, Satoshi Kuhara, Shigeki Ehira, Rei Narikawa, Satoshi Tabata, Takashi Hamano, Katsuhiko Okada, Shizue Yoshihara, Hiroshi Katoh, Masahiko Ikeuchi, Ayako Kamei, Mikio Tsuzuki, Masayuki Ohmori, Kousuke Tashiro

Publikováno v: The Journal of General and Applied Microbiology. 50:1-8

We prepared microarrays that contain genomic sequences of a heterocyst-forming filamentous cyanobacterium Anabaena sp. PCC 7120. The complete genome of this cyanobacterium codes for about 5,368 protein-coding genes in the main chromosome of 6.4 Mbp.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d68607ed9992721e7f0d37c26e1e78b2
https://doi.org/10.2323/jgam.50.1

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Characterization of Genes Encoding Multi-domain Proteins in the Genome of the Filamentous Nitrogen-fixing Cyanobacterium Anabaena sp. Strain PCC 7120

Autor: Shuichi Kawashima, Shinobu Okamoto, Minoru Kanehisa, Rei Narikawa, Takakazu Kaneko, Satoshi Tabata, Peter P. Wolk, Shigeki Ehira, Susumu Goto, Takatomo Fujisawa, Hidehisa Yoshimura, Shizue Yoshihara, Hiroshi Katoh, Teruo Ogawa, Masahiko Ikeuchi, Naoki Sato, Ayako Kamei, Masayuki Ohmori

Publikováno v: DNA Research. 8:271-284

Computational analysis of gene structures in the genome of Anabaena sp. PCC 7120 revealed the presence of a large number of genes encoding proteins with multiple functional domains. This was most evident in the genes for signal transduction pathway a

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https://doi.org/10.1093/dnares/8.6.271

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