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Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages

Autor: Hug, LA, Thomas, BC, Sharon, I, Brown, CT, Sharma, R, Hettich, RL, Wilkins, MJ, Williams, KH, Singh, A, Banfield, JF

Publikováno v: Environmental microbiology, vol 18, iss 1
Hug, LA; Thomas, BC; Sharon, I; Brown, CT; Sharma, R; Hettich, RL; et al.(2016). Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages. Environmental Microbiology, 18(1), 159-173. doi: 10.1111/1462-2920.12930. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/2f1480x2

© 2016 Society for Applied Microbiology and John Wiley & Sons Ltd. Nitrogen, sulfur and carbon fluxes in the terrestrial subsurface are determined by the intersecting activities of microbial community members, yet the organisms responsible are large

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https://escholarship.org/uc/item/2f1480x2

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Metaproteomics reveals functional shifts in microbial and human proteins during a preterm infant gut colonization case

Autor: Young, JC, Pan, C, Adams, RM, Brooks, B, Banfield, JF, Morowitz, MJ, Hettich, RL

Publikováno v: Young, JC; Young, JC; Young, JC; Pan, C; Adams, RM; Adams, RM; et al.(2015). Metaproteomics reveals functional shifts in microbial and human proteins during a preterm infant gut colonization case. Proteomics. doi: 10.1002/pmic.201400563. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/0898b6js

© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim. Microbial colonization of the human gastrointestinal tract plays an important role in establishing health and homeostasis. However, the time-dependent functional signatures of microbial and human pr

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http://www.escholarship.org/uc/item/0898b6js

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Recoding of the stop codon UGA to glycine by a BD1-5/SN-2 bacterium and niche partitioning between Alpha- and Gammaproteobacteria in a tidal sediment microbial community naturally selected in a laboratory chemostat

Autor: Hanke, A, Hamann, E, Sharma, R, Geelhoed, JS, Hargesheimer, T, Kraft, B, Meyer, V, Lenk, S, Osmers, H, Wu, R, Makinwa, K, Hettich, RL, Banfield, JF, Tegetmeyer, HE, Strous, M

Publikováno v: Hanke, A; Hamann, E; Sharma, R; Geelhoed, JS; Hargesheimer, T; Kraft, B; et al.(2014). Recoding of the stop codon UGA to glycine by a BD1-5/SN-2 bacterium and niche partitioning between Alpha-and Gammaproteobacteria in a tidal sediment microbial community naturally selected in a laboratory chemostat. Frontiers in Microbiology, 5(MAY). doi: 10.3389/fmicb.2014.00231. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/994883zj

Sandy coastal sediments are global hotspots for microbial mineralization of organic matter and denitrification. These sediments are characterized by advective porewater flow, tidal cycling and an active and complex microbial community. Metagenomic se

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