Multimodular type I polyketide synthases in algae evolve by module duplications and displacement of AT domains in trans

Autor: Natalie Heimerl, Severin Sasso, Ekaterina Shelest, Maximilian Fichtner

Publikováno v: Shelest, E, Heimerl, N, Fichtner, M & Sasso, S 2015, ' Multimodular type I polyketide synthases in algae evolve by module duplications and displacement of AT domains in trans ', BMC Genomics, vol. 16, no. 1, 1015 . https://doi.org/10.1186/s12864-015-2222-9
BMC Genomics

Background Polyketide synthase (PKS) catalyzes the biosynthesis of polyketides, which are structurally and functionally diverse natural products in microorganisms and plants. Here, we have analyzed available full genome sequences of microscopic and m

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::47b68819963834b56c06bbcebb37a21d
https://researchportal.port.ac.uk/portal/en/publications/multimodular-type-i-polyketide-synthases-in-algae-evolve-by-module-duplications-and-displacement-of-at-domains-in-trans(b5523520-dead-4a21-b00d-a2edb249cff9).html

Analysis of Expressed Sequence Tags from the Marine Microalga Pseudochattonella farcimen (Dictyochophyceae)

Autor: Uwe John, Russell J. S. Orr, Bente Edvardsen, Kjetill S. Jakobsen, Simon M. Dittami, Ingvild Riisberg

Publikováno v: EPIC3Protist, doi:10.1016/j.protis.2011.07.004., 163, pp. 143-161
Protist

Pseudochattonella farcimen (Eikrem, Edvardsen, et Throndsen) is a unicellular alga belonging to the Dictyochophyceae (Heterokonta). It forms recurring blooms in Scandinavian coastal waters, and has been associated to fish mortality. Here we report th

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5e05f78f6246233eb14626702699eec4

Expressed sequence tag-derived polymorphic SSR markers for Fucus serratus and amplification in other species of Fucus

Autor: Gareth A. Pearson, Bank Beszteri, James A. Coyer, Galice Hoarau, Jeanine L. Olsen

Publikováno v: Molecular Ecology Resources, 9(1), 168-170. Wiley

The seaweed genus Fucus is a dominant component of intertidal shores throughout the North Atlantic and North Pacific and has been the focus of considerable developmental, ecological, and evolutionary research for the past century. Here, we present de

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a6882aafc3e73f0a739b59ac7747b426
https://pubmed.ncbi.nlm.nih.gov/21564592

HECTAR: A method to predict subcellular targeting in heterokonts

Autor: J. Mark Cock, Yann Guermeur, Bernhard Gschloessl

Publikováno v: BMC Bioinformatics
BMC Bioinformatics, 2008, 9 (393), pp.9:393. ⟨10.1186/1471-2105-9-393⟩
BMC Bioinformatics, BioMed Central, 2008, 9 (393), pp.9:393. ⟨10.1186/1471-2105-9-393⟩
BMC Bioinformatics, Vol 9, Iss 1, p 393 (2008)

Background The heterokonts are a particularly interesting group of eukaryotic organisms; they include many key species of planktonic and coastal algae and several important pathogens. To understand the biology of these organisms, it is necessary to b

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ad266a67371142aeb4bcb7493db7e5b6
https://hal.science/hal-00359779

The mitochondrial genome of the brown alga Laminaria digitata: a comparative analysis

Autor: S. Loiseaux-de Goër, MP Oudot-le Secq, Bernard Kloareg

Publikováno v: European Journal of Phycology, 37(2), 163-172
European Journal of Phycology, 163-172
STARTPAGE=163;ENDPAGE=172;TITLE=European Journal of Phycology

We report here the complete sequence of the mitochondrial genome of the brown alga Laminaria digitata (Hudson) J.V. Lamouroux. L. digitata mtDNA is a circular molecule of 38,007 bp (64.9 % A+ T), encoding 63 genes and 3 ORFs and with only 6-7 % of no

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::af90824eb1921e1ae304155c7c35ba81
https://research.rug.nl/en/publications/e716710f-75cb-474e-adec-381d49aa6701