EukProt: A database of genome-scale predicted proteins across the diversity of eukaryotes

Autor: Richter, Daniel J., Berney, Cédric, Strassert, Jürgen F. H., Poh, Yu-Ping, Herman, Emily K., Muñoz-Gómez, Sergio A., Wideman, Jeremy G., Burki, Fabien, de Vargas, Colomban

Publikováno v: Peer Community Journal, Vol 2, Iss , Pp - (2022)

EukProt is a database of published and publicly available predicted protein sets selected to represent the breadth of eukaryotic diversity, currently including 993 species from all major supergroups as well as orphan taxa. The goal of the database is

Externí odkaz: https://doaj.org/article/0aaaccdebcfb402f82b983a426590c9f

Evolutionary analysis of cellular reduction and anaerobicity in the hyper-prevalent gut microbe Blastocystis

Autor: Záhonová, Kristína, Low, Ross S., Warren, Christopher J., Cantoni, Diego, Herman, Emily K., Yiangou, Lyto, Ribeiro, Cláudia A., Phanprasert, Yasinee, Brown, Ian R., Rueckert, Sonja, Baker, Nicola L., Tachezy, Jan, Betts, Emma L., Gentekaki, Eleni, van der Giezen, Mark, Clark, C. Graham, Jackson, Andrew P., Dacks, Joel B., Tsaousis, Anastasios D.

Publikováno v: In Current Biology 19 June 2023 33(12):2449-2464

Characterisation of eight cattle with Swyer syndrome by whole‐genome sequencing.

Autor: Berry, Donagh P.¹ (AUTHOR) donagh.berry@teagasc.ie, Herman, Emily K.² (AUTHOR), Carthy, Tara R.¹ (AUTHOR), Jennings, Rebecca³ (AUTHOR), Bandi‐Kenari, Nahid² (AUTHOR), O'Connor, Rebecca E.³ (AUTHOR), Mee, John F.¹ (AUTHOR), O'Donovan, Jim⁴ (AUTHOR), Mathews, Daragh⁵ (AUTHOR), Stothard, Paul² (AUTHOR)

Publikováno v: Animal Genetics. Apr2023, Vol. 54 Issue 2, p93-103. 11p.

Evaluating the potential of third generation metagenomic sequencing for the detection of BRD pathogens and genetic determinants of antimicrobial resistance in chronically ill feedlot cattle.

Autor: Freeman, Claire N.¹ (AUTHOR), Herman, Emily K.² (AUTHOR), Abi Younes, Jennifer¹ (AUTHOR), Ramsay, Dana E.¹ (AUTHOR), Erikson, Nathan¹ (AUTHOR), Stothard, Paul² (AUTHOR), Links, Matthew G.^3,4 (AUTHOR), Otto, Simon J. G.⁵ (AUTHOR), Waldner, Cheryl¹ (AUTHOR) cheryl.waldner@usask.ca

Publikováno v: BMC Veterinary Research. 6/2/2022, Vol. 18 Issue 1, p1-15. 15p.

Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri.

Autor: Herman, Emily K.^1,2 (AUTHOR) eherman@ualberta.ca, Greninger, Alex^3,4 (AUTHOR), van der Giezen, Mark⁵ (AUTHOR), Ginger, Michael L.⁶ (AUTHOR), Ramirez-Macias, Inmaculada^1,7 (AUTHOR), Miller, Haylea C.^8,9 (AUTHOR), Morgan, Matthew J.¹⁰ (AUTHOR), Tsaousis, Anastasios D.¹¹ (AUTHOR), Velle, Katrina¹² (AUTHOR), Vargová, Romana¹³ (AUTHOR), Záhonová, Kristína^1,14,15 (AUTHOR), Najle, Sebastian Rodrigo^16,17 (AUTHOR), MacIntyre, Georgina¹⁸ (AUTHOR), Muller, Norbert¹⁹ (AUTHOR), Wittwer, Mattias²⁰ (AUTHOR), Zysset-Burri, Denise C.²¹ (AUTHOR), Eliáš, Marek¹³ (AUTHOR), Slamovits, Claudio H.²² (AUTHOR), Weirauch, Matthew T.^23,24 (AUTHOR), Fritz-Laylin, Lillian¹² (AUTHOR)

Publikováno v: BMC Biology. 7/22/2021, Vol. 19 Issue 1, p1-18. 18p.