Zobrazeno 1 - 10 of 1 158 pro vyhledávání: '"Henry, C M"'
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Akademický článek
Detecting structural variations with precise breakpoints using low-depth WGS data from a single oxford nanopore MinION flowcell
Autor: Henry C. M. Leung, Huijing Yu, Yifan Zhang, Wing Sze Leung, Ivan F. M. Lo, Ho Ming Luk, Wai-Chun Law, Ka Kui Ma, Chak Lim Wong, Yat Sing Wong, Ruibang Luo, Tak-Wah Lam
Publikováno v: Scientific Reports, Vol 12, Iss 1, Pp 1-8 (2022)
Abstract Structural variation (SV) is a major cause of genetic disorders. In this paper, we show that low-depth (specifically, 4×) whole-genome sequencing using a single Oxford Nanopore MinION flow cell suffices to support sensitive detection of SV,
Externí odkaz: https://doaj.org/article/f6842310431a4a36b0dd0196e0ce34ff
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4
Akademický článek
Detecting structural variations with precise breakpoints using low-depth WGS data from a single oxford nanopore MinION flowcell.
Autor: Leung, Henry C. M.1 (AUTHOR), Yu, Huijing1 (AUTHOR), Zhang, Yifan1 (AUTHOR), Leung, Wing Sze1 (AUTHOR), Lo, Ivan F. M.2 (AUTHOR), Luk, Ho Ming2 (AUTHOR), Law, Wai-Chun3 (AUTHOR), Ma, Ka Kui1 (AUTHOR), Wong, Chak Lim1 (AUTHOR), Wong, Yat Sing1 (AUTHOR), Luo, Ruibang1 (AUTHOR) rbluo@cs.hku.hk, Lam, Tak-Wah1 (AUTHOR) twlam@cs.hku.hk
Publikováno v: Scientific Reports. 3/16/2022, Vol. 12 Issue 1, p1-8. 8p.
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5
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Deterministic Polynomial-Time Algorithms for Designing Short DNA Words
Autor: Kao, Ming-Yang, Leung, Henry C. M., Sun, He, Zhang, Yong
Designing short DNA words is a problem of constructing a set (i.e., code) of n DNA strings (i.e., words) with the minimum length such that the Hamming distance between each pair of words is at least k and the n words satisfy a set of additional const
Externí odkaz: http://arxiv.org/abs/1201.6358
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6
Rapid and economical drug resistance profiling with Nanopore MinION for clinical specimens with low bacillary burden of Mycobacterium tuberculosis
Autor: Bone S.F. Tang, Yvonne Chung, Chun Hang Au, Dona N. Ho, Tsun Leung Chan, Elaine Yue Ling Wong, Wai Sing Chan, Edmond S. K. Ma, Tak-Wah Lam, Henry C. M. Leung
Publikováno v: BMC Research Notes, Vol 13, Iss 1, Pp 1-7 (2020)
BMC Research Notes
Objective We designed and tested a Nanopore sequencing panel for direct tuberculosis drug resistance profiling. The panel targeted 10 resistance-associated loci. We assessed the feasibility of amplifying and sequencing these loci from 23 clinical spe
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2a20ac2692db5f7824de8d9c4319f402
http://link.springer.com/article/10.1186/s13104-020-05287-9
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7
Potential utility of metagenomic sequencing for improving etiologic diagnosis of infective endocarditis
Autor: Henry C. M. Leung, Wai-Sing Chan, Edmond S. K. Ma, Dinghua Li, Chun Hang Au, Dona N. Ho, Tak-Wah Lam, Bone S.F. Tang, T. K. Chan
Publikováno v: Future Cardiology. 15:411-424
Aim: To explore potential utility of metagenomic sequencing for improving etiologic diagnosis of infective endocarditis (IE) caused by fastidious bacteria. Materials & methods: Plasma and heart valves of two patients, who were diagnosed with IE cause
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9a70c635c5f7969a356d22e379adb19d
https://doi.org/10.2217/fca-2018-0088
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8
Akademický článek
Preliminary investigations of an uncharacterized virus of winter wheat (Triticum aestivum L.) in England / Vorläufige Untersuchungen über ein neues Virus des Winterweizens (Triticum aestivum L.) in England
Autor: Clover, G. R. G., Hugo, S. A., Harju, V. A., Wright, D. M., Henry, C. M.
Publikováno v: Zeitschrift für Pflanzenkrankheiten und Pflanzenschutz / Journal of Plant Diseases and Protection, 1999 May 01. 106(3), 275-283.
Externí odkaz: https://www.jstor.org/stable/43215290
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9
Akademický článek
PERGA: a paired-end read guided de novo assembler for extending contigs using SVM and look ahead approach.
Autor: Xiao Zhu, Henry C M Leung, Francis Y L Chin, Siu Ming Yiu, Guangri Quan, Bo Liu, Yadong Wang
Publikováno v: PLoS ONE, Vol 9, Iss 12, p e114253 (2014)
Since the read lengths of high throughput sequencing (HTS) technologies are short, de novo assembly which plays significant roles in many applications remains a great challenge. Most of the state-of-the-art approaches base on de Bruijn graph strategy
Externí odkaz: https://doaj.org/article/9ae0690a65ad42599be3f01b62fd6379
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10
ECNano: A Cost-Effective Workflow for Target Enrichment Sequencing and Accurate Variant Calling on 4,800 Clinically Significant Genes Using a Single MinION Flowcell
Autor: Ruibang Luo, Zheng Z, Alan W. Leung, Lui W, Luk Hm, Tak-Wah Lam, Henry C. M. Leung, Chak-Lim Wong, Lo If
BackgroundThe application of long-read sequencing using the Oxford Nanopore Technologies (ONT) MinION sequencer is getting more diverse in the medical field. Having a high sequencing error of ONT and limited throughput from a single MinION flowcell,
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::07fa11d88dea0e668390518bba5fde3c
https://doi.org/10.1101/2021.04.05.438455
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