Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Helena R. Ma"'
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-17 (2023)
Abstract The ability to effectively represent microbiome dynamics is a crucial challenge in their quantitative analysis and engineering. By using autoencoder neural networks, we show that microbial growth dynamics can be compressed into low-dimension
Externí odkaz:
https://doaj.org/article/a907d09897ab4c66b2c2f9dcc1f8d328
Autor:
Yuanchi Ha, Helena R Ma, Feilun Wu, Andrea Weiss, Katherine Duncker, Helen Z Xu, Jia Lu, Max Golovsky, Daniel Reker, Lingchong You
Publikováno v:
PLoS Computational Biology, Vol 20, Iss 6, p e1012185 (2024)
Multi-factor screenings are commonly used in diverse applications in medicine and bioengineering, including optimizing combination drug treatments and microbiome engineering. Despite the advances in high-throughput technologies, large-scale experimen
Externí odkaz:
https://doaj.org/article/e84a46d7904c4e1988874984de5cb571
Publikováno v:
Molecular Systems Biology.
Publikováno v:
Molecular systems biologyReferences.
Plasmid fitness is directed by two orthogonal processes-vertical transfer through cell division and horizontal transfer through conjugation. When considered individually, improvements in either mode of transfer can promote how well a plasmid spreads
Treatment of sensitive bacteria with beta-lactam antibiotics often leads to two salient population-level features: a transient increase in total population biomass before a subsequent decline, and a linear correlation between growth and killing rates
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1d156588191827ad0641bdc636f3f76e
https://doi.org/10.1101/2022.11.18.517151
https://doi.org/10.1101/2022.11.18.517151
Autor:
Vance G. Fowler, Joshua T. Thaden, Xiao Peng, Wenchen Song, Minfeng Xiao, Lingchong You, Deverick J. Anderson, Helena R. Ma, Carolyn Zhang
Publikováno v:
Proc Natl Acad Sci U S A
In biology, it is often critical to determine the identity of an organism and phenotypic traits of interest. Whole-genome sequencing can be useful for this but has limited power for trait prediction. However, we can take advantage of the inherent inf
Autor:
Helena R. Ma, Lingchong You
Publikováno v:
Nature Chemical Biology. 15:850-852
Asymmetric cell division, which generates daughter cells with distinct characteristics, is a mechanism for creating complex systems through cellular differentiation. Two studies in this issue develop synthetic platforms that program spatial localizat
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 1927
The Keio single gene knockout collection comprises approximately 4000 mutants of E. coli K12 strain BW25113, where each mutant contains a kanamycin resistance cassette in place of a single nonessential gene. This mutant library has proven to be incre
Publikováno v:
Methods in Molecular Biology ISBN: 9781493991419
The Keio single gene knockout collection comprises approximately 4000 mutants of E. coli K12 strain BW25113, where each mutant contains a kanamycin resistance cassette in place of a single nonessential gene. This mutant library has proven to be incre
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0842bef7a21a29f45146a794ef55a9be
https://doi.org/10.1007/978-1-4939-9142-6_9
https://doi.org/10.1007/978-1-4939-9142-6_9
Autor:
Deverick J. Anderson, Allison J. Lopatkin, Hannah R. Meredith, Gregory Batt, Helena R. Ma, Anna J. Lee, Lingchong You, Virgile Andreani
Publikováno v:
Science Advances
Science Advances, 2018, 4 (12), pp.eaau1873. ⟨10.1126/sciadv.aau1873⟩
Science Advances, American Association for the Advancement of Science (AAAS), 2018, 4 (12), pp.eaau1873. ⟨10.1126/sciadv.aau1873⟩
Science Advances, 2018, 4 (12), pp.eaau1873. ⟨10.1126/sciadv.aau1873⟩
Science Advances, American Association for the Advancement of Science (AAAS), 2018, 4 (12), pp.eaau1873. ⟨10.1126/sciadv.aau1873⟩
Applying an ecological framework to bacterial antibiotic responses improves understanding of population recovery.
An essential property of microbial communities is the ability to survive a disturbance. Survival can be achieved through resistance
An essential property of microbial communities is the ability to survive a disturbance. Survival can be achieved through resistance
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9b0454dabc90a827fccc278fd99df4a0
https://hal.inria.fr/hal-01950376
https://hal.inria.fr/hal-01950376