Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing

Autor: Aflitos, Saulo A., Schijlen, Elio, Finkers, Richard, Smit, Sandra, Wang, Jun, Zhang, Gengyun, Li, Ning, Mao, Likai, de Jong, Hans, Bakker, Freek, Gravendeel, Barbara, Breit, Timo, Dirks, Rob, Huits, Henk, Struss, Darush, Wagner, Ruth, van Leeuwen, Hans, van Ham, Roeland, Fito, Laia, Guigner, Laëtitia, Sevilla, Myrna, Ellul, Philippe, Ganko, Eric W., Kapur, Arvind, Reclus, Emmanuel, de Geus, Bernard, van de Geest, Henri, Hekkert, Bas te Lintel, Van Haarst, Jan C., Smits, Lars, Koops, Andries, Perez, Gabino Sanchez, de Ridder, Dick, van Heusden, Sjaak, Visser, Richard, Quan, Zhiwu, Min, Jiumeng, Liao, Li, Wang, Xiaoli, Wang, Guangbiao, Yue, Zhen, Yang, Xinhua, Xu, Na, Schranz, Eric, Smets, Eric F., Vos, Rutger A., Rauwerda, Han, Ursem, Remco, Schuit, Cees, Kerns, Mike, Berg, Jan van den, Vriezen, Wim H., Janssen, Antoine, Jahrman, Torben, Moquet, Frederic, Bonnet, Julien, Peters, Sander A.

Publikováno v: The Plant Journal 80.1 (2014): 136-148

Genetic variation in the tomato clade was explored by sequencing a selection of 84 tomato accessions and related wild species representative for the Lycopersicon, Arcanum, Eriopersicon, and Neolycopersicon groups. We present a reconstruction of three

Externí odkaz: http://arxiv.org/abs/1504.05610

Additional file 22: of Correcting palindromes in long reads after whole-genome amplification

Autor: Warris, Sven, Schijlen, Elio, Geest, Henri Van De, Rahulsimham Vegesna, Hesselink, Thamara, Hekkert, Bas Te Lintel, Perez, Gabino Sanchez, Medvedev, Paul, Makova, Kateryna, Ridder, Dick De

Dotplots mapping DBY gene containing GorY scaffold to GorY-Clean contig. (DOCX 70 kb)

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4003379401e50bcbfbe0c7e442cf7471

Additional file 3: of Correcting palindromes in long reads after whole-genome amplification

Autor: Warris, Sven, Schijlen, Elio, Geest, Henri Van De, Rahulsimham Vegesna, Hesselink, Thamara, Hekkert, Bas Te Lintel, Perez, Gabino Sanchez, Medvedev, Paul, Makova, Kateryna, Ridder, Dick De

Mapping Report for Ath-Clean BLASR-mapping. (PDF 418 kb)

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::042df58cbc709b232f7fa09a59bf2832

Additional file 9: of Correcting palindromes in long reads after whole-genome amplification

Autor: Warris, Sven, Schijlen, Elio, Geest, Henri Van De, Rahulsimham Vegesna, Hesselink, Thamara, Hekkert, Bas Te Lintel, Perez, Gabino Sanchez, Medvedev, Paul, Makova, Kateryna, Ridder, Dick De

Comparison of published GorY assembly to GorY-Clean in X-degenerate genes. (DOCX 34 kb)

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::97cc1672df7a0d3040abc36ff8b9bdb9

Biochemical and Molecular Analysis of Pink Tomatoes: Deregulated Expression of the Gene Encoding Transcription Factor S1MYB12 Leads to Pink Tomato Fruit Color

Autor: Ballester Ana-Rosa, Molthoff Jos, de Vos, Ric, Hekkert Bas te Lintel, Orzaez Diego, Fernandez-Moreno Josefina-Patricia, Tripodi Pasquale, Grandillo Silvana, Martin Cathie, Heldens, Jos, Ykema Marieke, Granell Antonio, Bovy Arnaud

Publikováno v: Plant physiology (Online) 152 (2010): 71–84. doi:10.1104/pp.109.147322
info:cnr-pdr/source/autori:Ballester Ana-Rosa; Molthoff Jos; de Vos, Ric; Hekkert Bas te Lintel; Orzaez Diego; Fernandez-Moreno Josefina-Patricia; Tripodi Pasquale; Grandillo Silvana; Martin Cathie; Heldens, Jos; Ykema Marieke; Granell Antonio; Bovy Arnaud/titolo:Biochemical and Molecular Analysis of Pink Tomatoes: Deregulated Expression of the Gene Encoding Transcription Factor S1MYB12 Leads to Pink Tomato Fruit Color/doi:10.1104%2Fpp.109.147322/rivista:Plant physiology (Online)/anno:2010/pagina_da:71/pagina_a:84/intervallo_pagine:71–84/volume:152

The color of tomato fruit is mainly determined by carotenoids and flavonoids. Phenotypic analysis of an introgression line (IL) population derived from a cross between Solanum lycopersicum 'Moneyberg' and the wild species Solanum chmielewskii reveale

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=cnr_________::df4068181052a28e50d74197f7fe4f2d
http://www.cnr.it/prodotto/i/183171