WeFaceNano: a user-friendly pipeline for complete ONT sequence assembly and detection of antibiotic resistance in multi-plasmid bacterial isolates

Autor: Astrid P. Heikema, Rick Jansen, Saskia D. Hiltemann, John P. Hays, Andrew P. Stubbs

Publikováno v: BMC Microbiology, Vol 21, Iss 1, Pp 1-11 (2021)

Abstract Background Bacterial plasmids often carry antibiotic resistance genes and are a significant factor in the spread of antibiotic resistance. The ability to completely assemble plasmid sequences would facilitate the localization of antibiotic r

Externí odkaz: https://doaj.org/article/a2a910bd7d154b26bafac90a34e96e95

The Role of the Respiratory Microbiome and Viral Presence in Lower Respiratory Tract Infection Severity in the First Five Years of Life

Autor: Ivo Hoefnagels, Josephine van de Maat, Jeroen J.A. van Kampen, Annemarie van Rossum, Charlie Obihara, Gerdien A. Tramper-Stranders, Astrid P. Heikema, Willem de Koning, Anne-Marie van Wermerskerken, Deborah Horst-Kreft, Gertjan J.A. Driessen, Janine Punt, Frank J. Smit, Andrew Stubbs, Jeroen G. Noordzij, John P. Hays, Rianne Oostenbrink

Publikováno v: Microorganisms, Vol 9, Iss 7, p 1446 (2021)

Lower respiratory tract infections (LRTIs) in children are common and, although often mild, a major cause of mortality and hospitalization. Recently, the respiratory microbiome has been associated with both susceptibility and severity of LRTI. In thi

Externí odkaz: https://doaj.org/article/25e123459fdb4646b453e7a3d481cf15

Siglec-7 specifically recognizes Campylobacter jejuni strains associated with oculomotor weakness in Guillain–Barré syndrome and Miller Fisher syndrome

Autor: Heikema, A.P., Jacobs, B.C., Horst-Kreft, D., Huizinga, R., Kuijf, M.L., Endtz, H.P., Samsom, J.N., van Wamel, W.J.B.

Publikováno v: In Clinical Microbiology and Infection February 2013 19(2):E106-E112

Biomolecule sulphation and novel methylations related to guillain-barré syndrome-associated campylobacter jejuni serotype hs:19

Autor: Heikema, Astrid P, Strepis, Nikolaos, Horst-Kreft, Deborah, Huynh, Steven, Zomer, Aldert, Kelly, David J, Cooper, Kerry K, Parker, Craig T, Klinische infectiologie en microb. lab., dI&I I&I-4

Publikováno v: Microbial genomics, 7(11):000660. Microbiology Society
Microbial genomics, 7(11), 1. Microbiology Society

Campylobacter jejuni strains that produce sialylated lipooligosaccharides (LOS) can cause the immune-mediated disease Guillain-Barré syndrome (GBS). The risk of GBS after infection with C. jejuni Penner serotype HS:19 is estimated to be at least six

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d0a5b8d00d84ec32a78a53bb3c936fa2
http://www.scopus.com/inward/record.url?scp=85121151341&partnerID=8YFLogxK

The Role of the Respiratory Microbiome and Viral Presence in Lower Respiratory Tract Infection Severity in the First Five Years of Life

Autor: Astrid P. Heikema, Janine Punt, John P. Hays, Gerdien A. Tramper-Stranders, Frank J Smit, Anne-Marie van Wermerskerken, Willem de Koning, Ivo Hoefnagels, Annemarie M. C. van Rossum, Rianne Oostenbrink, Charlie C. Obihara, Andrew P. Stubbs, Josephine van de Maat, Deborah Horst-Kreft, Jeroen J. A. van Kampen, GJ Driessen, Jeroen G. Noordzij

Publikováno v: Microorganisms, Vol 9, Iss 1446, p 1446 (2021)
Microorganisms, 9(7). Multidisciplinary Digital Publishing Institute (MDPI)
Microorganisms, 9(7):1446. Multidisciplinary Digital Publishing Institute (MDPI)
Microorganisms
Volume 9
Issue 7

Lower respiratory tract infections (LRTIs) in children are common and, although often mild, a major cause of mortality and hospitalization. Recently, the respiratory microbiome has been associated with both susceptibility and severity of LRTI. In thi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f59311a48c2a3bcbfd5f79015063fd70
https://www.mdpi.com/2076-2607/9/7/1446