Zobrazeno 1 - 10
of 18
pro vyhledávání: '"Heather, Ordonez"'
Autor:
Georges Natsoulis, John M Bell, Hua Xu, Jason D Buenrostro, Heather Ordonez, Susan Grimes, Daniel Newburger, Michael Jensen, Jacob M Zahn, Nancy Zhang, Hanlee P Ji
Publikováno v:
PLoS ONE, Vol 6, Iss 6, p e21088 (2011)
We have developed an integrated strategy for targeted resequencing and analysis of gene subsets from the human exome for variants. Our capture technology is geared towards resequencing gene subsets substantially larger than can be done efficiently wi
Externí odkaz:
https://doaj.org/article/e85a5483fa764adc85f7122b49dc7a44
Publikováno v:
Nucleic Acids Research
Mycobacterial Lhr is a DNA damage-inducible superfamily 2 helicase that uses adenosine triphosphate (ATP) hydrolysis to drive unidirectional 3′-to-5′ translocation along single-stranded DNA (ssDNA) and to unwind RNA:DNA duplexes en route. ATPase,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eef6a9612a952307e56fb665ccee06b3
https://doi.org/10.1093/nar/gkx1163
https://doi.org/10.1093/nar/gkx1163
Autor:
Arnold Han, Xiao Li, Solongo B. Ziraldo, Michael Snyder, Aaron J. W. Hsueh, Tarjei S. Mikkelsen, Kathryn A. Larkin, Vincent C. Luca, Julie Wilhelmy, Akifumi Ootani, Heather Ordonez, Luis A. Chia, Kelly Roelf, Mark Lee, Christopher R. Bolen, Junlei Chang, Hiroo Ueno, Calvin J. Kuo, Susan J. Henning, Paige S. Davies, Jessica M. Terry, Kelley S. Yan, Jenny Yuan, Phillip Belgrader, K. Christopher Garcia, Melissa H. Wong, Amanda T. Mah, Irving L. Weissman, Claudia Y. Janda, Grace X.Y. Zheng, Richard J. von Furstenberg
Publikováno v:
Nature. 545:238-242
The canonical Wnt/β-catenin signalling pathway governs diverse developmental, homeostatic and pathological processes. Palmitoylated Wnt ligands engage cell-surface frizzled (FZD) receptors and LRP5 and LRP6 co-receptors, enabling β-catenin nuclear
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5aa310a617e94084df137ea0768acf8c
https://doi.org/10.1038/nature22313
https://doi.org/10.1038/nature22313
Autor:
Francesca Meschi, Indira Wu, David Stafford, Andrew Wei Xu, Heather Ordonez, Jill Herschleb, Esty Holt, Tony Makarewicz, Shazia Mahamdallie, Elise Ruark, Josh Delaney, Adam Lowe, Pranav Patel, Stephen R. Williams, Christopher Hindson, Sarah T. Garcia, Nikka Keivanfar, Alvaro Martinez Barrio, Ian T. Fiddes, Keith Bjornson, Sheila Seal, Preyas Shah, Ariel Royall, Claudia Catalanotti, Patrick Marks, Jamie L. Marshall, Daniel G. MacArthur, Rajiv Bharadwaj, Nazneen Rahman, Bill Kengli Lin, Sofia Kyriazopoulou-Panagiotopoulou, Susanna Jett, Adrian Fehr, Haynes Heaton, Christopher J. O'Keefe, Deanna M. Church, Andrew D. Price, Shamoni Maheshwari, Brendan Galvin, Cassandra B. Jabara, Kamila Belhocine, Monkol Lek, Michael Schnall-Levin, Jorge Bernate
Publikováno v:
Genome research. 29(4)
Large-scale population analyses coupled with advances in technology have demonstrated that the human genome is more diverse than originally thought. To date, this diversity has largely been uncovered using short-read whole-genome sequencing. However,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::90ac82353829897df4a141dd59feda77
https://pubmed.ncbi.nlm.nih.gov/30894395
https://pubmed.ncbi.nlm.nih.gov/30894395
Autor:
Patrick Marks, Sarah Garcia, Alvaro Martinez Barrio, Kamila Belhocine, Jorge Bernate, Rajiv Bharadwaj, Keith Bjornson, Claudia Catalanotti, Josh Delaney, Adrian Fehr, Ian T. Fiddes, Brendan Galvin, Haynes Heaton, Jill Herschleb, Christopher Hindson, Esty Holt, Cassandra B. Jabara, Susanna Jett, Nikka Keivanfar, Sofia Kyriazopoulou-Panagiotopoulou, Monkol Lek, Bill Lin, Adam Lowe, Shazia Mahamdallie, Shamoni Maheshwari, Tony Makarewicz, Jamie Marshall, Francesca Meschi, Chris O’keefe, Heather Ordonez, Pranav Patel, Andrew Price, Ariel Royall, Elise Ruark, Sheila Seal, Michael Schnall-Levin, Preyas Shah, Stephen Williams, Indira Wu, Andrew Wei Xu, Nazneen Rahman, Daniel MacArthur, Deanna M. Church
Large-scale population based analyses coupled with advances in technology have demonstrated that the human genome is more diverse than originally thought. To date, this diversity has largely been uncovered using short read whole genome sequencing. Ho
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::57d0453a799d81bfca88092832de0b65
https://doi.org/10.1101/230946
https://doi.org/10.1101/230946
Autor:
William Stedman, Han Cao, Michael Saghbini, Jason Bobe, Alex Hastie, David Catoe, Arend Sidow, Marc L. Salit, Kristina Giorda, Alexander Wait Zaranek, Stephen T. Sherry, Zeljko Dzakula, Gintaras Deikus, R Truty, Erich Jaeger, Alexa B. R. McIntyre, Karoline Bjarnesdatter Rypdal, Christopher C. Chang, Robert Sebra, Srinka Ghosh, Grace X.Y. Zheng, Jonathan Trow, Yuling Liu, Tiffany Y. Liang, Khoa Pham, Fiona Hyland, Heather Ordonez, Dhruva Chandramohan, Noah Spies, Ziming Weng, Sofia Kyriazopoulou-Panagiotopoulou, Yutao Fu, Eric E. Schadt, Lindsay K. Vang, Ali Bashir, Madeleine Ball, Christopher E. Mason, Preston W. Estep, Keyan Zhao, George M. Church, Justin M. Zook, Ying Sheng, Mark Chaisson, Patrick Marks, Natali Gulbahce, Elizabeth Henaff, Patrice A Mudivarti, Feng Chen, Jennifer McDaniel, Michael Schnall-Levin, Chunlin Xiao, Noah Alexander, Ali Moshrefi
Publikováno v:
Scientific Data
BMC Genomics
BMC Genomics
Background The human genome contains variants ranging in size from small single nucleotide polymorphisms (SNPs) to large structural variants (SVs). High-quality benchmark small variant calls for the pilot National Institute of Standards and Technolog
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5b3063a4374c4cce8f3661a1831b6bb6
Autor:
Kelley S, Yan, Claudia Y, Janda, Junlei, Chang, Grace X Y, Zheng, Kathryn A, Larkin, Vincent C, Luca, Luis A, Chia, Amanda T, Mah, Arnold, Han, Jessica M, Terry, Akifumi, Ootani, Kelly, Roelf, Mark, Lee, Jenny, Yuan, Xiao, Li, Christopher R, Bolen, Julie, Wilhelmy, Paige S, Davies, Hiroo, Ueno, Richard J, von Furstenberg, Phillip, Belgrader, Solongo B, Ziraldo, Heather, Ordonez, Susan J, Henning, Melissa H, Wong, Michael P, Snyder, Irving L, Weissman, Aaron J, Hsueh, Tarjei S, Mikkelsen, K Christopher, Garcia, Calvin J, Kuo
Publikováno v:
Nature. 545(7653)
The canonical Wnt/β-catenin signalling pathway governs diverse developmental, homeostatic and pathological processes. Palmitoylated Wnt ligands engage cell-surface frizzled (FZD) receptors and LRP5 and LRP6 co-receptors, enabling β-catenin nuclear
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::e4ab59cd2c61b3ebdcc802cd90145b85
https://pubmed.ncbi.nlm.nih.gov/28586642
https://pubmed.ncbi.nlm.nih.gov/28586642
Autor:
Rajiv Bharadwaj, Hanlee P. Ji, Serge Saxonov, Alex Kindwall, Melissa Luo, Patrick Marks, Clara Bermejo, Landon Merrill, Francesca Meschi, Jessica M. Terry, Adrian Fehr, John Bell, Gerard M Vurens, Kristina Giorda, Adam Lowe, Heather Ordonez, Michael Schnall-Levin, Jorge Bernate, Josephine Y Lee, Phillip Belgrader, Glenn K. Lockwood, Steven W Short, Sukhvinder Kaur, Shawn Gauby, Lawrence Greenfield, Geoffrey P. McDermott, Stephanie Greer, Pranav Patel, Andrew D. Price, Benjamin J. Hindson, Nikola O Kondov, Grace X.Y. Zheng, Sofia Kyriazopoulou-Panagiotopoulou, David E Birch, Luz Montesclaros, Alexander Wong, Kamila Belhocine, Susan M. Grimes, Ryan Wilson, Donald A. Masquelier, Patrice A Mudivarti, Kevin D. Ness, Mirna Jarosz, Adrian Chan, Indira Wu, Erik S. Hopmans, Paul Wyatt, David Stafford, Paul Hardenbol, Anthony J. Makarewicz, Joshua Delaney, Yuan Li, Zachary Bent, Christopher Hindson, Christina Wood, Keith Bjornson, Billy T. Lau, William Haynes Heaton
Publikováno v:
Nature biotechnology, vol 34, iss 3
Haplotyping of human chromosomes is a prerequisite for cataloguing the full repertoire of genetic variation. We present a microfluidics-based, linked-read sequencing technology that can phase and haplotype germline and cancer genomes using nanograms
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::61cceca38f7f8889494f6c31fa5fc631
https://escholarship.org/uc/item/0z84g4gh
https://escholarship.org/uc/item/0z84g4gh
Publikováno v:
Nucleic Acids Research
The Escherichia coli RecQ DNA helicase participates in a pathway of DNA repair that operates in parallel to the recombination pathway driven by the multisubunit helicase-nuclease machine RecBCD. The model mycobacterium Mycobacterium smegmatis execute
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0e603abf067d9c6c43de3a41e4532356
https://doi.org/10.1093/nar/gks046
https://doi.org/10.1093/nar/gks046
Mycobacteria have a large and distinctive ensemble of DNA helicases that function in DNA replication, repair, and recombination. Little is known about the roster of RNA helicases in mycobacteria or their roles in RNA transactions. The 912-amino-acid
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4856829da3858a9edd79213927b566b8
https://europepmc.org/articles/PMC4560288/
https://europepmc.org/articles/PMC4560288/