Genomic reconstruction of the SARS-CoV-2 epidemic in England

Autor: Vöhringer, HS, Sanderson, T, Sinnott, M, De Maio, N, Nguyen, T, Goater, R, Schwach, F, Harrison, I, Hellewell, J, Ariani, CV, Gonçalves, S, Jackson, DK, Johnston, I, Jung, AW, Saint, C, Sillitoe, J, Suciu, M, Goldman, N, Panovska-Griffiths, J, Abnizova, I, Aigrain, L, Alderton, A, Ali, M, Allen, L, Amato, R, Anderson, R, Ariani, C, Austin-Guest, S, Bala, S, Barrett, J, Bassett, A, Battleday, K, Beal, J, Beale, M, Beaver, C, Bellany, S, Bellerby, T, Bellis, K, Berger, D, Berriman, M, Betteridge, E, Bevan, P, Binley, S, Bishop, J, Blackburn, K, Bonfield, J, Boughton, N, Bowker, S, Brendler-Spaeth, T, Bronner, I, Brooklyn, T, Buddenborg, SK, Bush, R, Caetano, C, Cagan, A, Carter, N, Cartwright, J, Monteiro, TC, Chapman, L, Chillingworth, T-J, Clapham, P, Clark, R, Clarke, A, Clarke, C, Cole, D, Cook, E, Coppola, M, Cornell, L, Cornwell, C, Corton, C, Crackett, A, Cranage, A, Craven, H, Craw, S, Crawford, M, Cutts, T, Dabrowska, M, Davies, M, Davies, R, Dawson, J, Day, C, Densem, A, Dibling, T, Dockree, C, Dodd, D, Dogga, S, Dorman, M, Dougan, G, Dougherty, M, Dove, A, Drummond, L, Drury, E, Dudek, M, Durham, J, Durrant, L, Easthope, E, Eckert, S, Ellis, P, Farr, B, Fenton, M, Ferrero, M, Flack, N, Fordham, H, Forsythe, G, Foulser, L, Francis, M, Fraser, A, Freeman, A, Galvin, A, Garcia-Casado, M, Gedny, A, Girgis, S, Glover, J, Goncalves, S, Goodwin, S, Gould, O, Gourtovaia, M, Gray, A, Gray, E, Griffiths, C, Gu, Y, Guerin, F, Hamilton, W, Hanks, H, Harrison, E, Harrott, A, Harry, E, Harvison, J, Heath, P, Hernandez-Koutoucheva, A, Hobbs, R, Holland, D, Holmes, S, Hornett, G, Hough, N, Huckle, L, Hughes-Hallet, L, Hunter, A, Inglis, S, Iqbal, S, Jackson, A, Jackson, D, James, K, Jamrozy, D, Verdejo, CJ, Jones, M, Kallepally, K, Kane, L, Kay, K, Kay, S, Keatley, J, Keith, A, King, A, Kitchin, L, Kleanthous, M, Klimekova, M, Korlevic, P, Krasheninnkova, K, Lane, G, Langford, C, Laverack, A, Law, K, Lawniczak, M, Lensing, S, Leonard, S, Letchford, L, Lewis, K, Lewis-Wade, A, Liddle, J, Lin, Q, Lindsay, S, Linsdell, S, Livett, R, Lo, S, Long, R, Lovell, J, Ludden, C, Mack, J, Maddison, M, Makunin, A, Mamun, I, Mansfield, J, Marriott, N, Martin, M, Mayho, M, McCarthy, S, McClintock, J, McGuigan, S, McHugh, S, McMinn, L, Meadows, C, Mobley, E, Moll, R, Morra, M, Morrow, L, Murie, K, Nash, S, Nathwani, C, Naydenova, P, Neaverson, A, Nelson, R, Nerou, E, Nicholson, J, Nimz, T, Noell, GG, O’Meara, S, Ohan, V, Oliver, K, Olney, C, Ormond, D, Oszlanczi, A, Palmer, S, Pang, YF, Pardubska, B, Park, N, Parmar, A, Patel, G, Patel, M, Payne, M, Peacock, S, Petersen, A, Plowman, D, Preston, T, Prestwood, L, Puethe, C, Quail, M, Rajan, D, Rajatileka, S, Rance, R, Rawlings, S, Redshaw, N, Reynolds, J, Reynolds, M, Rice, S, Richardson, M, Roberts, C, Robinson, K, Robinson, M, Robinson, D, Rogers, H, Rojo, EM, Roopra, D, Rose, M, Rudd, L, Sadri, R, Salmon, N, Saul, D, Scott, C, Seekings, P, Shirley, L, Simms, A, Sivadasan, S, Siwek, B, Sizer, D, Skeldon, K, 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C, Frampton, D, Hamilton, WL, Witney, AA, Bucca, G, Pope, CF, Moore, C, Thomson, EC, Harrison, EM, Smith, CP, Rogan, F, Beckwith, SM, Murray, A, Singleton, D, Eastick, K, Sheridan, LA, Randell, P, Jackson, LM, Fairley, DJ, Loose, MW, Watkins, J, Moses, S, Nicholls, S, Bull, M, Smith, DL, Aanensen, DM, Aggarwal, D, Shepherd, JG, Curran, MD, Parmar, S, Parker, MD, Williams, C, Glaysher, S, Underwood, AP, Bashton, M, Pacchiarini, N, Loveson, KF, Byott, M, Carabelli, AM, Templeton, KE, de Silva, TI, Wang, D, Langford, CF, Gunson, RN, Cottrell, S, O’Grady, J, Kwiatkowski, D, Lillie, PJ, Cortes, N, Moore, N, Thomas, C, Burns, PJ, Mahungu, TW, Liggett, S, Beckett, AH, Holden, MTG, Levett, LJ, Osman, H, Hassan-Ibrahim, MO, Simpson, DA, Chand, M, Gupta, RK, Darby, AC, Paterson, S, Pybus, OG, Volz, EM, de Angelis, D, Robertson, DL, Page, AJ, Bassett, AR, Wong, N, Taha, Y, Erkiert, MJ, Spencer Chapman, MH, Dewar, R, McHugh, MP, Mookerjee, S, Aplin, S, Harvey, M, Sass, T, Umpleby, H, Wheeler, H, 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The evolution of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus leads to new variants that warrant timely epidemiological characterization. Here we use the dense genomic surveillance data generated by the COVID-19 Genomics UK

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::a9942c17abc60289ca896b8a872ae428
https://eprints.whiterose.ac.uk/182254/1/s41586-021-04069-y.pdf

A multi-country comparative study of two treponemal tests for the serodiagnosis of syphilis amongst men who have sex with men (MSM): Chemo-luminescent assay vs Treponema pallidum particle agglutination assay.

Autor: Gios L; Infectious Division of Infectious Diseases, Department of Medicine, Verona University Hospital, Verona, Italy. gios.lorenzo@gmail.com.; WHO Collaborating Centre for Sexual Health and Vulnerable Populations - Epidemiology Unit - Division of Infectious Diseases, Department of Medicine, Verona University Hospital, Verona, Italy. gios.lorenzo@gmail.com.; Infectious Diseases Section, Department of Diagnostics and Public Health, University of Verona, Piazzale L. Scuro, 10, 37134, Verona, Italy. gios.lorenzo@gmail.com., Mirandola M; Infectious Division of Infectious Diseases, Department of Medicine, Verona University Hospital, Verona, Italy.; WHO Collaborating Centre for Sexual Health and Vulnerable Populations - Epidemiology Unit - Division of Infectious Diseases, Department of Medicine, Verona University Hospital, Verona, Italy.; School of Sport and Health Sciences, University of Brighton, Brighton, UK., Cordioli M; Infectious Division of Infectious Diseases, Department of Medicine, Verona University Hospital, Verona, Italy.; WHO Collaborating Centre for Sexual Health and Vulnerable Populations - Epidemiology Unit - Division of Infectious Diseases, Department of Medicine, Verona University Hospital, Verona, Italy., Zorzi A; WHO Collaborating Centre for Sexual Health and Vulnerable Populations - Epidemiology Unit - Division of Infectious Diseases, Department of Medicine, Verona University Hospital, Verona, Italy.; Virology and Microbiology Unit, Department of Pathology and Diagnostics, Verona University Hospital, Verona, Italy., Sherriff N; School of Sport and Health Sciences, University of Brighton, Brighton, UK., Vera J; Brighton & Sussex Medical School, University of Sussex and University of Brighton, Brighton, UK., Wlazly D; Brighton & Sussex Medical School, University of Sussex and University of Brighton, Brighton, UK., Hassan-Ibrahim MO; Department of Microbiology & Infection, Royal Sussex County Hospital, University Hospitals Sussex NHS Foundation Trust (Brighton & Haywards Heath Sites), Brighton, UK., Padovese V; Genitourinary Clinic, Department of Dermatology and Venereology, Mater Dei Hospital, Msida, Malta, L-Imsida, Malta., Anabel Darmanin; Genitourinary Clinic, Department of Dermatology and Venereology, Mater Dei Hospital, Msida, Malta, L-Imsida, Malta., Peeling RW; Clinical Research Department, London School of Hygiene & Tropical Medicine, London, UK.; Medical Microbiology Department, University of Manitoba, Winnipeg, MB, Canada., Unemo M; WHO Collaborating Centre for Gonorrhoea and Other STIs, Department of Laboratory Medicine, Örebro University, Örebro, Sweden.; Institute for Global Health, University College London (UCL), London, UK., Blondeel K; Department of Sexual and Reproductive Health and Research (includes the UNDP/UNFPA/UNICEF/WHO/World Bank Special Programme of Research, Development and Research Training in Human Reproduction [HRP]), World Health Organization, Geneva, Switzerland.; Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium., Toskin I; Department of Sexual and Reproductive Health and Research (includes the UNDP/UNFPA/UNICEF/WHO/World Bank Special Programme of Research, Development and Research Training in Human Reproduction [HRP]), World Health Organization, Geneva, Switzerland.

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Autor: Conway RJ; Department of Medicine, 12190Brighton and Sussex Medical School, Brighton, UK., Cook S; Department of Medicine, 12190Brighton and Sussex Medical School, Brighton, UK., Malone C; Department of Microbiology and Infection, 1949Brighton and Sussex University Hospitals NHS Trust, Brighton, UK., Bone S; SpeeDx Pty Ltd, Sydney, Australia., Hassan-Ibrahim MO; Department of Microbiology and Infection, 1949Brighton and Sussex University Hospitals NHS Trust, Brighton, UK., Soni S; Department of Medicine, 12190Brighton and Sussex Medical School, Brighton, UK.; Department of Sexual Health and HIV, 1949Brighton and Sussex University Hospitals NHS Trust, Brighton, UK.

Publikováno v: International journal of STD & AIDS [Int J STD AIDS] 2021 Jul; Vol. 32 (8), pp. 758-765. Date of Electronic Publication: 2021 Mar 23.

High rates of treatment failure for Mycoplasma genitalium among men and women attending a sexual health clinic.

Autor: Ovens KJ; Department of GUM/HIV, Brighton and Sussex University Hospitals NHS Trust, Brighton, UK katie.ovens@nhs.net., Reynolds-Wright JJ; University of Edinburgh, University of Edinburgh MRC Centre for Reproductive Health, Edinburgh, UK., Cross ELA; Brighton and Sussex University Hospitals NHS Trust, Brighton, UK., Rickwood L; Brighton and Sussex Medical School, Brighton, UK., Hassan-Ibrahim MO; Department of Microbiology/Virology & Infection, Brighton and Sussex University Hospitals NHS Trust, Brighton, UK., Soni S; Department of GUM/HIV, Brighton and Sussex University Hospitals NHS Trust, Brighton, UK.

Publikováno v: BMJ sexual & reproductive health [BMJ Sex Reprod Health] 2020 Apr; Vol. 46 (2), pp. 132-138. Date of Electronic Publication: 2019 Nov 13.

Hepatitis C core antigen testing: a reliable, quick, and potentially cost-effective alternative to hepatitis C polymerase chain reaction in diagnosing acute hepatitis C virus infection.

Autor: Cresswell FV; Lawson Unit, Department of HIV and Sexual Health, Royal Sussex County Hospital., Fisher M; Lawson Unit, Department of HIV and Sexual Health, Royal Sussex County Hospital Brighton and Sussex Medical School., Hughes DJ; Lawson Unit, Department of HIV and Sexual Health, Royal Sussex County Hospital., Shaw SG; Lawson Unit, Department of HIV and Sexual Health, Royal Sussex County Hospital., Homer G; Department of Virology/Microbiology and Infection, Royal Sussex County Hospital, Brighton, United Kingdom., Hassan-Ibrahim MO; Department of Virology/Microbiology and Infection, Royal Sussex County Hospital, Brighton, United Kingdom.

Publikováno v: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America [Clin Infect Dis] 2015 Jan 15; Vol. 60 (2), pp. 263-6. Date of Electronic Publication: 2014 Oct 09.