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Autor:
Smith, Joshua T., Eckhardt, Elissa M., Hansel, Nicole B., Eliato, Tahmineh Rahmani, Martin, Isabella W., Andam, Cheryl P.
Additional file 8: Fig. S4. Bactdating statistical tests and MCMC trace plots. (a) Initial rooted phylogeny and correlation test between date and root-to-tip distance withing the phylogeny for CC5. (b) Bactdating trace plots constructed by periodic s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ccd091bf5d68cc1af320d785381ddf7b
Autor:
Smith, Joshua T., Eckhardt, Elissa M., Hansel, Nicole B., Eliato, Tahmineh Rahmani, Martin, Isabella W., Andam, Cheryl P.
Additional file 4: Fig. S2. Pan-genome analysis of 323 S. aureus genomes. (a) Presence-absence matrix of gene clusters as determined by Roary, aligned to the phylogeny. Blue indicates presence. (b) Gene frequency histogram indicating the number of ge
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0bd378a55f7686b76d9a08ad1179456e
Autor:
Smith, Joshua T., Eckhardt, Elissa M., Hansel, Nicole B., Eliato, Tahmineh Rahmani, Martin, Isabella W., Andam, Cheryl P.
Additional file 2: Fig. S1. Assembly statistics of the S. aureus genomes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::96d856fd11969ebcca75b8374b7d6efc
Autor:
Smith, Joshua T., Eckhardt, Elissa M., Hansel, Nicole B., Eliato, Tahmineh Rahmani, Martin, Isabella W., Andam, Cheryl P.
Additional file 6: Fig. S3. Distribution of virulence genes using VirulenceFinder and the Virulence Factor Database (VFDB). Details are shown in Supplementary Table S4.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8a135d9814d38b064fdb19993b892e4a
Autor:
Souza SSR; Department of Biological Sciences, University at Albany, State University of New York, Albany, New York, NY USA., Smith JT; Department of Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, NH USA.; Infectious Disease and Microbiome Program, Broad Institute of MIT and Harvard, Cambridge, MA USA., Marcovici MM; Department of Biological Sciences, University at Albany, State University of New York, Albany, New York, NY USA., Eckhardt EM; Dartmouth-Hitchcock Medical Center and Dartmouth College Geisel School of Medicine, Lebanon, NH USA., Hansel NB; Dartmouth-Hitchcock Medical Center and Dartmouth College Geisel School of Medicine, Lebanon, NH USA., Martin IW; Dartmouth-Hitchcock Medical Center and Dartmouth College Geisel School of Medicine, Lebanon, NH USA., Andam CP; Department of Biological Sciences, University at Albany, State University of New York, Albany, New York, NY USA.
Publikováno v:
Npj antimicrobials and resistance [NPJ Antimicrob Resist] 2024; Vol. 2 (1), pp. 14. Date of Electronic Publication: 2024 May 07.