Zobrazeno 1 - 10
of 36
pro vyhledávání: '"Han Rauwerda"'
Autor:
Han Rauwerda, Johanna F. B. Pagano, Wim C. de Leeuw, Wim Ensink, Ulrike Nehrdich, Mark de Jong, Martijs Jonker, Herman P. Spaink, Timo M. Breit
Publikováno v:
BMC Genomics, Vol 18, Iss 1, Pp 1-15 (2017)
Abstract Background Recently, much progress has been made in the field of gene-expression in early embryogenesis. However, the dynamic behaviour of transcriptomes in individual embryos has hardly been studied yet and the time points at which pools of
Externí odkaz:
https://doaj.org/article/577b5c8bbf8a4bd08690c7087eeb13a2
Autor:
Johanna F.B. Pagano, Han Rauwerda, Wim C. de Leeuw, Paul Wackers, Mark de Jong, Wim Ensink, Rob Dekker, Ulrike Nehrdich, Herman P. Spaink, Martijs Jonker, Timo M. Breit
Publikováno v:
Data in Brief, Vol 8, Iss , Pp 69-72 (2016)
Maternal mRNA that is present in the mature oocyte plays an important role in the proper development of the early embryo. To elucidate the role of the maternal transcriptome we recently reported a microarray study on individual zebrafish eggs from fi
Externí odkaz:
https://doaj.org/article/04b0bf32654a4810ba8c720532c6e203
Autor:
Oskar Bruning, Wendy Rodenburg, Paul F K Wackers, Conny van Oostrom, Martijs J Jonker, Rob J Dekker, Han Rauwerda, Wim A Ensink, Annemieke de Vries, Timo M Breit
Publikováno v:
PLoS ONE, Vol 11, Iss 1, p e0145252 (2016)
CONFOUNDING FACTORS:In transcriptomics experimentation, confounding factors frequently exist alongside the intended experimental factors and can severely influence the outcome of a transcriptome analysis. Confounding factors are regularly discussed i
Externí odkaz:
https://doaj.org/article/9c9f1b67c4b84efab422c64f1e9cddaf
Autor:
Han Rauwerda, Paul Wackers, Johanna F B Pagano, Mark de Jong, Wim Ensink, Rob Dekker, Ulrike Nehrdich, Herman P Spaink, Martijs Jonker, Timo M Breit
Publikováno v:
PLoS ONE, Vol 11, Iss 1, p e0147151 (2016)
Maternal mRNA present in mature oocytes plays an important role in the proper development of the early embryo. As the composition of the maternal transcriptome in general has been studied with pooled mature eggs, potential differences between individ
Externí odkaz:
https://doaj.org/article/336bf35796874f8381027f00104b0340
Autor:
Oskar Bruning, Wendy Rodenburg, Conny T van Oostrom, Martijs J Jonker, Mark de Jong, Rob J Dekker, Han Rauwerda, Wim A Ensink, Annemieke de Vries, Timo M Breit
Publikováno v:
PLoS ONE, Vol 9, Iss 5, p e97089 (2014)
In transcriptomics research, design for experimentation by carefully considering biological, technological, practical and statistical aspects is very important, because the experimental design space is essentially limitless. Usually, the ranges of va
Externí odkaz:
https://doaj.org/article/9403c40e85914206a5057d186977a512
Autor:
Han Rauwerda, Johanna F.B. Pagano, Wim C. de Leeuw, Wim Ensink, Marina van Olst, Ulrike Nehrdich, Martijs J. Jonker, Herman P. Spaink, Timo M. Breit
At gastrulation in the zebrafish embryogenesis, the embryonic genome is switched on to produce transcripts that are used for the maintenance and development of the embryo. In a previous study from late blastula to mid gastrula on the transcriptomes o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::97b466851ff21f7c678adff59163f10d
https://doi.org/10.1101/2022.09.29.510050
https://doi.org/10.1101/2022.09.29.510050
To battle the COVID-19 pandemic, widespread testing for the presence of the SARS-CoV-2 virus is worldwide being employed by specific real-time RT-PCR (rRT-PCR) of viral RNA. The CDC has issued a recommended panel of PCR-based test sets that entail se
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::db3192c8c30b342b6035025f778ce688
https://doi.org/10.1101/2020.06.12.147819
https://doi.org/10.1101/2020.06.12.147819
New observations on non-coding RNAs involved in the dual translation system in zebrafish development
Autor:
Timo M. Breit, M. van Olst, Herman P. Spaink, Ulrike Nehrdich, R.J. Dekker, Han Rauwerda, E. Mittring, S. van Leeuwen, P.L. van der Jagt, Johanna F.B. Pagano, Wim A. Ensink, W.C. de Leeuw
Cellular translation relies heavily on the involvements of several types of non-coding RNAs. In previous studies we have identified a dual translation system in zebrafish development, involving maternal-type and somatic-type rRNAs, snoRNAs, and snRNA
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::08d24f9f77277ac87df0c92b6927c836
Autor:
S. van Leeuwen, M. van Olst, Herman P. Spaink, Martijs J. Jonker, Wim A. Ensink, W.C. de Leeuw, Han Rauwerda, A. Bos, R.J. Dekker, Johanna F.B. Pagano, Ulrike Nehrdich, Timo M. Breit
Splicing removes intronic RNA sequences from pre-mRNA molecules and enables, by alternative splicing, the generation of multiple unique RNA molecules from a single gene. As such, splicing is an essential part of the whole translation system of a cell
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::da394a7defa339be9bce98cac5a9e21d
https://doi.org/10.1101/858944
https://doi.org/10.1101/858944
Autor:
S. van Leeuwen, R.J. Dekker, Ulrike Nehrdich, Timo M. Breit, Martijs J. Jonker, Wim A. Ensink, Han Rauwerda, W.C. de Leeuw, M. van Olst, Herman P. Spaink, Locati, Johanna F.B. Pagano
Small nucleolar RNAs (snoRNAs) are non-coding RNAs that play an important role in the complex maturation process of ribosomal RNAs (rRNAs). SnoRNAs are categorized in classes, with each class member having several variants present in a genome. Simila
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e7999d9334e53c787bd2f0b4d1d5592a
https://doi.org/10.1101/858936
https://doi.org/10.1101/858936