GrAfSS: a webserver for substructure similarity searching and comparisons in the structures of proteins and RNA.

Autor: Ghani NSA; Institute of Systems Biology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor, Malaysia., Emrizal R; Department of Applied Physics, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor, Malaysia., Moffit SM; Department of Applied Physics, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor, Malaysia., Hamdani HY; Advanced Medical and Dental Institute, Universiti Sains Malaysia, Bertam, Kepala Batas 13200, Pulau Pinang, Malaysia., Ramlan EI; School of Medicine, University College Dublin, Belfield, Dublin 4, Ireland., Firdaus-Raih M; Institute of Systems Biology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor, Malaysia.; Department of Applied Physics, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor, Malaysia.

Publikováno v: Nucleic acids research [Nucleic Acids Res] 2022 Jul 05; Vol. 50 (W1), pp. W375-W383.

In silico molecular docking in DNA aptamer development.

Autor: Navien TN; Advanced Medical & Dental Institute (AMDI), Universiti Sains Malaysia, Bertam, 13200, Kepala Batas, Penang, Malaysia., Thevendran R; Advanced Medical & Dental Institute (AMDI), Universiti Sains Malaysia, Bertam, 13200, Kepala Batas, Penang, Malaysia., Hamdani HY; Advanced Medical & Dental Institute (AMDI), Universiti Sains Malaysia, Bertam, 13200, Kepala Batas, Penang, Malaysia., Tang TH; Advanced Medical & Dental Institute (AMDI), Universiti Sains Malaysia, Bertam, 13200, Kepala Batas, Penang, Malaysia. Electronic address: tangth@usm.my., Citartan M; Advanced Medical & Dental Institute (AMDI), Universiti Sains Malaysia, Bertam, 13200, Kepala Batas, Penang, Malaysia. Electronic address: citartan@usm.my.

Publikováno v: Biochimie [Biochimie] 2021 Jan; Vol. 180, pp. 54-67. Date of Electronic Publication: 2020 Oct 18.

COGNAC: a web server for searching and annotating hydrogen-bonded base interactions in RNA three-dimensional structures.

Autor: Firdaus-Raih M; School of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Malaysia Institute of Systems Biology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Malaysia firdaus@mfrlab.org., Hamdani HY; School of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Malaysia., Nadzirin N; School of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Malaysia., Ramlan EI; Department of Artificial Intelligence, Faculty of Computer Science and Information Technology, University of Malaya, 50603 Kuala Lumpur, Malaysia., Willett P; Information School, University of Sheffield, Western Bank, Sheffield S10 2TN, UK., Artymiuk PJ; Department of Molecular Biology and Biotechnology, Krebs Institute, University of Sheffield, Western Bank, Sheffield S10 2TN, UK.

Publikováno v: Nucleic acids research [Nucleic Acids Res] 2014 Jul; Vol. 42 (Web Server issue), pp. W382-8. Date of Electronic Publication: 2014 May 15.