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pro vyhledávání: '"Ha KCH"'
Alternative splicing (AS) is a widespread process underlying the generation of transcriptomic and proteomic diversity in metazoans. Major challenges in comprehensively detecting and quantifying patterns of AS are that RNA-seq datasets are expanding n
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::27bc40c53f56d9a3a32bbd432464ca07
https://doi.org/10.1101/158519
https://doi.org/10.1101/158519
Autor:
Ikelaar NA; Department of Neurology, Leiden University Medical Center, Leiden, Zuid-Holland, the Netherlands.; Duchenne Center Netherlands., Barnard AM; Department of Physical Therapy, University of Florida, Gainesville, FL, USA., Eng SWM; BioSymetrics, Inc., Huntington, NY, USA., Hosseini Vajargah S; BioSymetrics, Inc., Huntington, NY, USA., Ha KCH; BioSymetrics, Inc., Huntington, NY, USA., Kan HE; Duchenne Center Netherlands.; C.J. Gorter MRI Center, Department of Radiology, Leiden University Medical Center, Leiden, Zuid-Holland, the Netherlands., Vandenborne K; Department of Physical Therapy, University of Florida, Gainesville, FL, USA., Niks EH; Department of Neurology, Leiden University Medical Center, Leiden, Zuid-Holland, the Netherlands.; Duchenne Center Netherlands., Walter GA; Department of Physiology and Aging, University of Florida, Gainesville, FL, USA., Spitali P; Human Genetics Department, Leiden University Medical Center, Leiden, Zuid-Holland, the Netherlands.
Publikováno v:
MedRxiv : the preprint server for health sciences [medRxiv] 2024 Aug 07. Date of Electronic Publication: 2024 Aug 07.
Autor:
Ni Z; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Ahmed N; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada., Nabeel-Shah S; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada., Guo X; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Pu S; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Song J; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Marcon E; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Burke GL; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada., Tong AHY; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada.; Program in Genetics and Genome Biology, The Hospital for Sick Children, Toronto, ON Canada., Chan K; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada.; Program in Genetics and Genome Biology, The Hospital for Sick Children, Toronto, ON Canada., Ha KCH; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada., Blencowe BJ; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada., Moffat J; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada.; Program in Genetics and Genome Biology, The Hospital for Sick Children, Toronto, ON Canada.; Institute for Biomaterials and Biomedical Engineering, University of Toronto, Toronto, ON Canada., Greenblatt JF; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada.
Publikováno v:
Nucleic acids research [Nucleic Acids Res] 2024 May 08; Vol. 52 (8), pp. 4483-4501.
Autor:
Song J; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Nabeel-Shah S; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada., Pu S; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Lee H; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada; Department of Computer Science, University of Toronto, 10 King's College Road, Toronto, ON M5S 3G4, Canada., Braunschweig U; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Ni Z; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Ahmed N; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada., Marcon E; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Zhong G; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Ray D; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Ha KCH; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada., Guo X; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada., Zhang Z; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada; Department of Computer Science, University of Toronto, 10 King's College Road, Toronto, ON M5S 3G4, Canada., Hughes TR; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada., Blencowe BJ; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada., Greenblatt JF; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON M5A 1A8, Canada. Electronic address: jack.greenblatt@utoronto.ca.
Publikováno v:
Molecular cell [Mol Cell] 2022 Sep 01; Vol. 82 (17), pp. 3135-3150.e9. Date of Electronic Publication: 2022 Jul 31.
Autor:
Ha KCH; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, Toronto, ON, M5A 1A8, Canada.; Vector Institute, Toronto, ON, M5G 1M1, Canada.; BioSymetrics, Inc., Huntington, New York, NY, USA., Sterne-Weiler T; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, M5S 3E1, Canada., Morris Q; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, Toronto, ON, M5A 1A8, Canada.; Vector Institute, Toronto, ON, M5G 1M1, Canada.; Department of Computer Science, University of Toronto, Toronto, ON, M5S 4G4, Canada., Weatheritt RJ; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, M5S 3E1, Canada. r.weatheritt@garvan.org.au.; EMBL Australia, Garvan Institute of Medical Research, Darlinghurst, NSW, 2010, Australia. r.weatheritt@garvan.org.au.; St. Vincent Clinical School, University of New South Wales, Darlinghurst, NSW, 2010, Australia. r.weatheritt@garvan.org.au., Blencowe BJ; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, M5S 3E1, Canada. b.blencowe@utoronto.ca.; Department of Molecular Genetics, University of Toronto, Toronto, ON, M5A 1A8, Canada. b.blencowe@utoronto.ca.
Publikováno v:
Nature communications [Nat Commun] 2021 Jan 12; Vol. 12 (1), pp. 335. Date of Electronic Publication: 2021 Jan 12.
Autor:
Gonatopoulos-Pournatzis T; Donnelly Centre, University of Toronto, Toronto, Ontario, Canada. t.gonatopoulos@gmail.com., Aregger M; Donnelly Centre, University of Toronto, Toronto, Ontario, Canada., Brown KR; Donnelly Centre, University of Toronto, Toronto, Ontario, Canada., Farhangmehr S; Donnelly Centre, University of Toronto, Toronto, Ontario, Canada.; Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada., Braunschweig U; Donnelly Centre, University of Toronto, Toronto, Ontario, Canada., Ward HN; Bioinformatics and Computational Biology Graduate Program, University of Minnesota, Minneapolis, MN, USA., Ha KCH; Donnelly Centre, University of Toronto, Toronto, Ontario, Canada., Weiss A; Donnelly Centre, University of Toronto, Toronto, Ontario, Canada., Billmann M; Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, USA., Durbic T; Donnelly Centre, University of Toronto, Toronto, Ontario, Canada., Myers CL; Bioinformatics and Computational Biology Graduate Program, University of Minnesota, Minneapolis, MN, USA.; Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, USA., Blencowe BJ; Donnelly Centre, University of Toronto, Toronto, Ontario, Canada. b.blencowe@utoronto.ca.; Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada. b.blencowe@utoronto.ca., Moffat J; Donnelly Centre, University of Toronto, Toronto, Ontario, Canada. j.moffat@utoronto.ca.; Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada. j.moffat@utoronto.ca.; Institute for Biomedical Engineering, University of Toronto, Toronto, Ontario, Canada. j.moffat@utoronto.ca.
Publikováno v:
Nature biotechnology [Nat Biotechnol] 2020 May; Vol. 38 (5), pp. 638-648. Date of Electronic Publication: 2020 Mar 16.
Autor:
Rodrigues DC; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada., Mufteev M; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada; Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, Canada., Weatheritt RJ; Donnelly Center for Cellular and Biomolecular Research, University of Toronto, Toronto, ON M5S 3E1, Canada., Djuric U; Laboratory Medicine and Pathology Program, University Health Network, Toronto, ON M5G 2C4, Canada., Ha KCH; Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, Canada; Donnelly Center for Cellular and Biomolecular Research, University of Toronto, Toronto, ON M5S 3E1, Canada; Vector Institute, 661 University Avenue, Toronto, ON M5G 1M1, Canada., Ross PJ; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada., Wei W; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada., Piekna A; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada., Sartori MA; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada., Byres L; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada; Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, Canada., Mok RSF; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada; Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, Canada., Zaslavsky K; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada; Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, Canada., Pasceri P; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada., Diamandis P; Laboratory Medicine and Pathology Program, University Health Network, Toronto, ON M5G 2C4, Canada; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON M5S 1A1, Canada; Department of Pathology, University Health Network, Toronto, ON M5G 2C4, Canada., Morris Q; Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, Canada; Donnelly Center for Cellular and Biomolecular Research, University of Toronto, Toronto, ON M5S 3E1, Canada; Vector Institute, 661 University Avenue, Toronto, ON M5G 1M1, Canada., Blencowe BJ; Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, Canada; Donnelly Center for Cellular and Biomolecular Research, University of Toronto, Toronto, ON M5S 3E1, Canada., Ellis J; Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada; Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, Canada. Electronic address: jellis@sickkids.ca.
Publikováno v:
Cell reports [Cell Rep] 2020 Mar 24; Vol. 30 (12), pp. 4179-4196.e11.
Autor:
Sterne-Weiler T; Donnelly Centre, University of Toronto, Toronto M5S 3E1, Canada. Electronic address: tim.sterne.weiler@utoronto.ca., Weatheritt RJ; Donnelly Centre, University of Toronto, Toronto M5S 3E1, Canada; MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge CB2 0QH, UK; EMBL Australia, Garvan Institute of Medical Research, 384 Victoria Street, Darlinghurst, New South Wales 2010, Australia., Best AJ; Donnelly Centre, University of Toronto, Toronto M5S 3E1, Canada., Ha KCH; Donnelly Centre, University of Toronto, Toronto M5S 3E1, Canada; Department of Molecular Genetics, University of Toronto, Toronto M5S 3E1, Canada., Blencowe BJ; Donnelly Centre, University of Toronto, Toronto M5S 3E1, Canada; Department of Molecular Genetics, University of Toronto, Toronto M5S 3E1, Canada. Electronic address: b.blencowe@utoronto.ca.
Publikováno v:
Molecular cell [Mol Cell] 2018 Oct 04; Vol. 72 (1), pp. 187-200.e6. Date of Electronic Publication: 2018 Sep 13.
Autor:
Ha KCH; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON, M5A 1A8, Canada.; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON, M5S 3E1, Canada., Blencowe BJ; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON, M5A 1A8, Canada. b.blencowe@utoronto.ca.; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON, M5S 3E1, Canada. b.blencowe@utoronto.ca., Morris Q; Department of Molecular Genetics, University of Toronto, 1 King's College Circle, Toronto, ON, M5A 1A8, Canada. quaid.morris@utoronto.ca.; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, ON, M5S 3E1, Canada. quaid.morris@utoronto.ca.; Department of Computer Science, University of Toronto, 10 King's College Road, Toronto, ON, M5S 3G4, Canada. quaid.morris@utoronto.ca.; Vector Institute, 661 University Avenue, Toronto, ON, M5G 1M1, Canada. quaid.morris@utoronto.ca.
Publikováno v:
Genome biology [Genome Biol] 2018 Mar 28; Vol. 19 (1), pp. 45. Date of Electronic Publication: 2018 Mar 28.
Autor:
Tapial J; EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, 08003 Barcelona, Spain.; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain., Ha KCH; Donnelly Centre, University of Toronto, Toronto, Ontario M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 3E1, Canada., Sterne-Weiler T; Donnelly Centre, University of Toronto, Toronto, Ontario M5S 3E1, Canada., Gohr A; EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, 08003 Barcelona, Spain.; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain., Braunschweig U; Donnelly Centre, University of Toronto, Toronto, Ontario M5S 3E1, Canada., Hermoso-Pulido A; EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, 08003 Barcelona, Spain.; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain., Quesnel-Vallières M; Donnelly Centre, University of Toronto, Toronto, Ontario M5S 3E1, Canada.; Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 3E1, Canada., Permanyer J; EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, 08003 Barcelona, Spain.; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain., Sodaei R; EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, 08003 Barcelona, Spain.; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain., Marquez Y; EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, 08003 Barcelona, Spain.; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain., Cozzuto L; EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, 08003 Barcelona, Spain.; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain., Wang X; Donnelly Centre, University of Toronto, Toronto, Ontario M5S 3E1, Canada., Gómez-Velázquez M; Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), 28029 Madrid, Spain., Rayon T; Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), 28029 Madrid, Spain., Manzanares M; Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), 28029 Madrid, Spain., Ponomarenko J; EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, 08003 Barcelona, Spain.; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain., Blencowe BJ; Donnelly Centre, University of Toronto, Toronto, Ontario M5S 3E1, Canada., Irimia M; EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, 08003 Barcelona, Spain.; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain.
Publikováno v:
Genome research [Genome Res] 2017 Oct; Vol. 27 (10), pp. 1759-1768. Date of Electronic Publication: 2017 Aug 30.